RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 LIG4P49917 911 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 MAGOHP61326 146 aaKnown RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 ZNF394Q53GI3 561 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 PEX26Q7Z412 305 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 SPATA4Q8NEY3 305 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 DHX38Q92620 1227 aaKnown RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 MAGOHBQ96A72 148 aaKnown RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.068e-7■■■■□ 24.2
CHRD-204ENST00000420973 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 P4HA2O15460 535 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 H2AFZP0C0S5 128 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ACTR2P61160 394 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 MAP7Q14244 749 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 H2AFVQ71UI9 128 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 SLC20A1Q8WUM9 679 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ABCF3Q9NUQ8 709 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 HEXIM1O94992 359 aaKnown RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 LMNB1P20700 586 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 HSD17B4P51659 736 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 VAMP7P51809 220 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 DHX9Q08211 1270 aaKnown RBP15.4■□□□□ 0.06
CHRD-204ENST00000420973 BFSP1Q12934 665 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 KRT71Q3SY84 523 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 C9orf131Q5VYM1 1079 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 HGSNATQ68CP4 663 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ANO5Q75V66 913 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 XXYLT1Q8NBI6 393 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ABHD8Q96I13 439 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 FNBP1Q96RU3 617 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ADAM22Q9P0K1 906 aa15.4■□□□□ 0.06
CHRD-204ENST00000420973 ZCCHC18P0CG32 403 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 NFKBIAP25963 317 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 NPTX2P47972 431 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 CACNA2D1P54289 1103 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 PPP2R2AP63151 447 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 LBRQ14739 615 aaKnown RBP15.39■□□□□ 0.05
CHRD-204ENST00000420973 RPS6KA1Q15418 735 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 SLC18A3Q16572 532 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 SLC30A5Q8TAD4 765 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 TRAPPC12Q8WVT3 735 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 ZBTB45Q96K62 511 aaPredicted RBP15.39■□□□□ 0.05
CHRD-204ENST00000420973 POLR3FQ9H1D9 316 aaPredicted RBP15.39■□□□□ 0.05
CHRD-204ENST00000420973 ARHGEF38Q9NXL2 777 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 SH3GLB1Q9Y371 365 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 CCDC160A6NGH7 325 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 DHX15O43143 795 aaKnown RBP15.39■□□□□ 0.05
CHRD-204ENST00000420973 ZNF862O60290 1169 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 PASD1Q8IV76 773 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 APLFQ8IW19 511 aaPredicted RBP15.39■□□□□ 0.05
CHRD-204ENST00000420973 TAS2R14Q9NYV8 317 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
CHRD-204ENST00000420973 TLDC2A0PJX2 215 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 SPDYE16A6NNV3 312 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 GJB1P08034 283 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 CYP2C8P10632 490 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 DSG3P32926 999 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 CFAP157Q5JU67 520 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 NLRP4Q96MN2 994 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 DDX50Q9BQ39 737 aaKnown RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 ETNK2Q9NVF9 386 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 HOXC10Q9NYD6 342 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 TRIM33Q9UPN9 1127 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 CYP26A1O43174 497 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 UBTFL6P0CB48 400 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 UHMK1Q8TAS1 419 aaKnown RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 DEPTORQ8TB45 409 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 BSNDQ8WZ55 320 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 FRMPD4Q14CM0 1322 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 A0A1W2PQJ5 194 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 PLS3P13797 630 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 ATP6V1C1P21283 382 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 MESDQ14696 234 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 STXBP2Q15833 593 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHRD-204ENST00000420973 COPS5Q92905 334 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 BTBD6Q96KE9 485 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 PFDN4Q9NQP4 134 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 OLFML3Q9NRN5 406 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 RABL2AQ9UBK7 228 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
CHRD-204ENST00000420973 SNX12Q9UMY4 172 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 UBIAD1Q9Y5Z9 338 aa15.38■□□□□ 0.05
CHRD-204ENST00000420973 KRT76Q01546 638 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 PABPC1LQ4VXU2 614 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 ARHGEF19Q8IW93 802 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 IQCKQ8N0W5 287 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms