RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MYL4P12829 197 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 ATF2P15336 505 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 PROZP22891 400 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 GDI1P31150 447 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 GUCY2FP51841 1108 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 SATB1Q01826 763 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 RAD51AP2Q09MP3 1159 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 PPP2R5AQ15172 486 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 ANKRD1Q15327 319 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 CTXN3Q4LDR2 81 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 RNF19BQ6ZMZ0 732 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 TTC8Q8TAM2 541 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 ERMNQ8TAM6 284 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 UROC1Q96N76 676 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 CHRDQ9H2X0 955 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 AVENQ9NQS1 362 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-203ENST00000420503 ARHGAP28Q9P2N2 729 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
LINC00339-203ENST00000420503 KMT2BQ9UMN6 2715 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-203ENST00000420503 PHLPP2Q6ZVD8 1323 aa14.11□□□□□ -0.15
LINC00339-203ENST00000420503 ANK1P16157 1881 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ATG2BQ96BY7 2078 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ARNTLO00327 626 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 SLC16A4O15374 487 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 NEFLP07196 543 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ELF1P32519 619 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 RPS9P46781 194 aaKnown RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 TOB1P50616 345 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 EFNA5P52803 228 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ANAPC15P60006 121 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 SPEM2Q0P670 501 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 Q6ZS52 159 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 PDZD4Q76G19 769 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 TCEAL8Q8IYN2 117 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 TTC9BQ8N6N2 239 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ZSCAN18Q8TBC5 510 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 C8orf76Q96K31 380 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 TBC1D32Q96NH3 1257 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 LRRC3BQ96PB8 259 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 PGLYRP2Q96PD5 576 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 ZNF334Q9HCZ1 680 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-203ENST00000420503 CNTN3Q9P232 1028 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 PIAS3Q9Y6X2 628 aa14.1□□□□□ -0.15
LINC00339-203ENST00000420503 RALGAPA1Q6GYQ0 2036 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 PPEF2O14830 753 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 TRAPPC3O43617 180 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 SOAT2O75908 522 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 KCNE1P15382 129 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 CCNE1P24864 410 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 MCM4P33991 863 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC00339-203ENST00000420503 YARSP54577 528 aaKnown RBP14.09□□□□□ -0.15
LINC00339-203ENST00000420503 SLC10A6Q3KNW5 377 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 TXNDC11Q6PKC3 985 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 FAM3CQ92520 227 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 DDX12PQ92771 950 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 DNASE1L2Q92874 299 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 SMARCD2Q92925 531 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 ZFYVE19Q96K21 471 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 SUSD3Q96L08 255 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 LRRC3Q9BY71 257 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 MRPL4Q9BYD3 311 aaKnown RBP14.09□□□□□ -0.15
LINC00339-203ENST00000420503 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 LRWD1Q9UFC0 647 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 PCDHB6Q9Y5E3 794 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 KIF26AQ9ULI4 1882 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-203ENST00000420503 MYH11P35749 1972 aa14.09□□□□□ -0.15
LINC00339-203ENST00000420503 NPHP3-ACAD11A0A0J9YXS1 232 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 SLC38A8A6NNN8 435 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 HEPACAM2A8MVW5 462 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 CHURC1-FNTBB4DL54 471 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 SYN3O14994 580 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 CXCL8P10145 99 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 CHRNB1P11230 501 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 MAGEA9P43362 315 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 FNTBP49356 437 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
LINC00339-203ENST00000420503 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 HAUS3Q68CZ6 603 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 HEATR6Q6AI08 1181 aaKnown RBP14.08□□□□□ -0.16
LINC00339-203ENST00000420503 RINT1Q6NUQ1 792 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 MPZL3Q6UWV2 235 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 PRR23BQ6ZRT6 265 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 TMC8Q8IU68 726 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 ACAP3Q96P50 834 aa14.08□□□□□ -0.16
LINC00339-203ENST00000420503 TMEM209Q96SK2 561 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms