RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 LRPAP1P30533 357 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 NTHL1P78549 312 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 GTF2BQ00403 316 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 MRPL58Q14197 206 aaKnown RBP23.2■■□□□ 1.3
PTPN4-202ENST00000420482 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 USP37Q86T82 979 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 MAP4K3Q8IVH8 894 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 TCEAL8Q8IYN2 117 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 DDX12PQ92771 950 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 EPSTI1Q96J88 318 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 CYP4F11Q9HBI6 524 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 FBXL5Q9UKA1 691 aa23.2■■□□□ 1.3
PTPN4-202ENST00000420482 FAM186AA6NE01 2351 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 A0A0B4J269 797 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 WDR27A2RRH5 827 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 PROB1E7EW31 1015 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 CPB1P15086 417 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 YWHAHQ04917 246 aaPredicted RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 PTPAQ15257 358 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 CWF19L1Q69YN2 538 aaKnown RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 SV2BQ7L1I2 683 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 BEST2Q8NFU1 509 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 HVCN1Q96D96 273 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 BACH2Q9BYV9 841 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 ST6GALNAC4Q9H4F1 302 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 SLC2A4RGQ9NR83 387 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 DNMT3BQ9UBC3 853 aaKnown RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 SEL1LQ9UBV2 794 aa23.19■■□□□ 1.3
PTPN4-202ENST00000420482 FBXO2Q9UK22 296 aaPredicted RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 PDCD11Q14690 1871 aaKnown RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 RIF1Q5UIP0 2472 aaKnown RBP23.19■■□□□ 1.3
PTPN4-202ENST00000420482 LACTBL1A8MY62 500 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 ZNF197O14709 1029 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 MEFVO15553 781 aaPredicted RBP23.18■■□□□ 1.3
PTPN4-202ENST00000420482 TBC1D4O60343 1298 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 TNFSF9P41273 254 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 CEBPZQ03701 1054 aaKnown RBP23.18■■□□□ 1.3
PTPN4-202ENST00000420482 SPAG1Q07617 926 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 RESTQ13127 1097 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 ZBTB6Q15916 424 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 SPECC1Q5M775 1068 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 IQCEQ6IPM2 695 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 DSTYKQ6XUX3 929 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 CCDC73Q6ZRK6 1079 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 GPR152Q8TDT2 470 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 FAM212AQ96EL1 285 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 SHDQ96IW2 340 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 AVENQ9NQS1 362 aaPredicted RBP23.18■■□□□ 1.3
PTPN4-202ENST00000420482 HCFC1R1Q9NWW0 138 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 GDE1Q9NZC3 331 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 CA14Q9ULX7 337 aa23.18■■□□□ 1.3
PTPN4-202ENST00000420482 MYO15AQ9UKN7 3530 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 K7ELQ4 463 aaPredicted RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 M0QZQ0 153 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 RHOP08100 348 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 NPR3P17342 541 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 GAP43P17677 238 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 NMT1P30419 496 aaKnown RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 ENOX2Q16206 610 aaKnown RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 ADALQ6DHV7 355 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 DYMQ7RTS9 669 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 ITFG1Q8TB96 612 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 LRRC15Q8TF66 581 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 FGF14Q92915 247 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 ARHGEF3Q9NR81 526 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 AFF4Q9UHB7 1163 aaKnown RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 CPSF3Q9UKF6 684 aaKnown RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 EXOC7Q9UPT5 735 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 DERAQ9Y315 318 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 INSL5Q9Y5Q6 135 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 MORC2Q9Y6X9 1032 aaPredicted RBP23.17■■□□□ 1.3
PTPN4-202ENST00000420482 SPTBN4Q9H254 2564 aa23.17■■□□□ 1.3
PTPN4-202ENST00000420482 PTPRZ1P23471 2315 aaPredicted RBP23.16■■□□□ 1.3
PTPN4-202ENST00000420482 ADRB2P07550 413 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 PFKPQ01813 784 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 POSTNQ15063 836 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 PHLDB3Q6NSJ2 640 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 PARM1Q6UWI2 310 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 NPAS3Q8IXF0 933 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 ZNF512Q96ME7 567 aaPredicted RBP23.16■■□□□ 1.3
PTPN4-202ENST00000420482 ASB7Q9H672 318 aa23.16■■□□□ 1.3
PTPN4-202ENST00000420482 KRBA1A5PL33 1030 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 STX6O43752 255 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 FAM189A1O60320 539 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 OAZ2O95190 189 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 NBL1P41271 181 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 POU5F1Q01860 360 aaKnown RBP23.15■■□□□ 1.3
PTPN4-202ENST00000420482 ADCY1Q08828 1119 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 TMEM132DQ14C87 1099 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 CYP4A22Q5TCH4 519 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 SPATA1Q5VX52 437 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 PDZD4Q76G19 769 aaPredicted RBP23.15■■□□□ 1.3
PTPN4-202ENST00000420482 ZNF720Q7Z2F6 126 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 CCDC105Q8IYK2 499 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 LEMD2Q8NC56 503 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 FIZ1Q96SL8 496 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 CORO1BQ9BR76 489 aa23.15■■□□□ 1.3
PTPN4-202ENST00000420482 MRPL44Q9H9J2 332 aaKnown RBP23.15■■□□□ 1.3
PTPN4-202ENST00000420482 TBC1D17Q9HA65 648 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms