RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 KRT19P08727 400 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 EEF1GP26641 437 aaKnown RBP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 MYO1EQ12965 1108 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 BIRC3Q13489 604 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 TRPC3Q13507 836 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 ZACNQ401N2 412 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 ZNF560Q96MR9 790 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 TMEM8AQ9HCN3 771 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 AGAP1Q9UPQ3 857 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 BECN2A8MW95 431 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 POLR2BP30876 1174 aaKnown RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 GCLMP48507 274 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 TAF6P49848 677 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 LILRA4P59901 499 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 ZNF445P59923 1031 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 BMS1Q14692 1282 aaKnown RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 NCAPHQ15003 741 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 KRT39Q6A163 491 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 TMEM173Q86WV6 379 aaPredicted RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 BCL7CQ8WUZ0 217 aaPredicted RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 LMAN2LQ9H0V9 348 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
CDRT15-201ENST00000420162 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
CDRT15-201ENST00000420162 SCN1AP35498 2009 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 ARHGEF37A1IGU5 675 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 F8W810 466 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 PMM2O15305 246 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 N4BP1O75113 896 aaKnown RBP16.3■□□□□ 0.2
CDRT15-201ENST00000420162 EFEMP2O95967 443 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
CDRT15-201ENST00000420162 ATICP31939 592 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 CETN1Q12798 172 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 KCNJ12Q14500 433 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 SV2CQ496J9 727 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 TCP11X2Q5H9J9 407 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
CDRT15-201ENST00000420162 FUT10Q6P4F1 479 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 DHX40Q8IX18 779 aaKnown RBP16.3■□□□□ 0.2
CDRT15-201ENST00000420162 C3orf58Q8NDZ4 430 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 ANKRD20A12PQ8NF67 263 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
CDRT15-201ENST00000420162 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 PPEF2O14830 753 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 GRM6O15303 877 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 P4HA2O15460 535 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 AFPP02771 609 aaKnown RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 SOD2P04179 222 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 FMO5P49326 533 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 MXI1P50539 228 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 TPM4P67936 248 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 KCNH2Q12809 1159 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 NCOA4Q13772 614 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 IQCB1Q15051 598 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 MAN2A1Q16706 1144 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 PTPROQ16827 1216 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 SGSM1Q2NKQ1 1148 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 RNF168Q8IYW5 571 aaPredicted RBP16.29■□□□□ 0.2
CDRT15-201ENST00000420162 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 HASPINQ8TF76 798 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 TAF4BQ92750 862 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 SUSD3Q96L08 255 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
CDRT15-201ENST00000420162 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms