RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CD302Q8IX05 232 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 RCOR2Q8IZ40 523 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 TTC30BQ8N4P2 665 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 RBBP8NLQ8NC74 664 aaPredicted RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 RAPGEF5Q92565 580 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 L3MBTL3Q96JM7 780 aaPredicted RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 SLC7A5P2Q9GIP4 190 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NDFIP2Q9NV92 336 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 USP54Q70EL1 1684 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 COL18A1P39060 1754 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 P4HA2O15460 535 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 CTIFO43310 598 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 PNMA6AP0CW24 399 aaPredicted RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 DDX5P17844 614 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 MUTP22033 750 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 ANTXR2P58335 489 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 NLRP11P59045 1033 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 CDR2Q01850 454 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 CCDC15Q0P6D6 951 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 WDR75Q8IWA0 830 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 PGBD3Q8N328 593 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 TBC1D19Q8N5T2 526 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 VGLL2Q8N8G2 317 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 PPHLN1Q8NEY8 458 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 SH2D3AQ9BRG2 576 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 VPS11Q9H270 941 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 UVRAGQ9P2Y5 699 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 CAPN11Q9UMQ6 739 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 TTC26A0AVF1 554 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 WDR91A4D1P6 747 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 ZNF197O14709 1029 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 DNAJC6O75061 913 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 PDGFRBP09619 1106 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 PDGFRAP16234 1089 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 GPS1Q13098 491 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 SPARCL1Q14515 664 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 ANGPTL8Q6UXH0 198 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 OR6P1Q8NGX9 317 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 SLITRK1Q96PX8 696 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 SENP7Q9BQF6 1050 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 TMEM8AQ9HCN3 771 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 DDTLA6NHG4 134 aaPredicted RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 TMPRSS15P98073 1019 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 DPYDQ12882 1025 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD23Q86SG2 305 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 ADSSL1Q8N142 457 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 SNF8Q96H20 258 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 TMEM169Q96HH4 297 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 CENPKQ9BS16 269 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 PARD6BQ9BYG5 372 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 TXLNGQ9NUQ3 528 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 LIMA1Q9UHB6 759 aaKnown RBP8.9□□□□□ -0.98
UBR4-206ENST00000419533 PPP1R9AQ9ULJ8 1098 aa8.9□□□□□ -0.98
UBR4-206ENST00000419533 MYPNQ86TC9 1320 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 UBA6A0AVT1 1052 aaPredicted RBP8.9□□□□□ -0.99
UBR4-206ENST00000419533 CCDC85CA6NKD9 419 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 GOLGA8MH3BSY2 632 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 MGEA5O60502 916 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 MYO1DO94832 1006 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 MYBP10242 640 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 MOXD1Q6UVY6 613 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 AMIGO3Q86WK7 504 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 ATPAF2Q8N5M1 289 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 TMX2Q9Y320 296 aa8.9□□□□□ -0.99
UBR4-206ENST00000419533 MYMKA6NI61 221 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 GCKP35557 465 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 GNL1P36915 607 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 PTK2BQ14289 1009 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 PIGHQ14442 188 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 ACAD11Q709F0 780 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 TRIM59Q8IWR1 403 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 MAML1Q92585 1016 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SEPT8Q92599 483 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 DPF3Q92784 378 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 UNC45AQ9H3U1 944 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 CATSPERBQ9H7T0 1116 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SYNPO2Q9UMS6 1093 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SLC4A7Q9Y6M7 1214 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 FAM205CA6NFA0 338 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 C3orf70A6NLC5 250 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 FOXN1O15353 648 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 MSCO60682 206 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 RGS7P49802 495 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SLC26A2P50443 739 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HERVK_113P62684 666 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 ZNF211Q13398 564 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 TDRD10Q5VZ19 366 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 ACER1Q8TDN7 264 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HTATIP2Q9BUP3 242 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 NIF3L1Q9GZT8 377 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms