RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 NCK2O43639 380 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 MAPRE2Q15555 327 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 RFX8Q6ZV50 586 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 MAN1C1Q9NR34 630 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.52
PTCH1-205ENST00000418258 MYO10Q9HD67 2058 aa11.77□□□□□ -0.52
PTCH1-205ENST00000418258 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 GOLGA8RI6L899 631 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 KDM1AO60341 852 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 SOAT1P35610 550 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 PRKCEQ02156 737 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 ZRANB3Q5FWF4 1079 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 RCOR2Q8IZ40 523 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 PDGFRAP16234 1089 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 EMC2Q15006 297 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 DCP1BQ8IZD4 617 aaKnown RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 TMEM39BQ9GZU3 492 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 BRD8Q9H0E9 1235 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 STN1Q9H668 368 aaKnown RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 GIMAP4Q9NUV9 329 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 NDE1Q9NXR1 346 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 DTNAQ9Y4J8 743 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 JCADQ9P266 1359 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 NPTXRO95502 500 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 KRT4P19013 534 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 RGS4P49798 205 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 TRADDQ15628 312 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 SNRNP35Q16560 246 aaKnown RBP11.77□□□□□ -0.53
PTCH1-205ENST00000418258 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 ARHGEF40Q8TER5 1519 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 RCAN1P53805 252 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 P3H1Q32P28 736 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 C6orf10Q5SRN2 563 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 APOL5Q9BWW9 433 aa11.77□□□□□ -0.53
PTCH1-205ENST00000418258 KIAA0391O15091 583 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 BRAFP15056 766 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 CSE1LP55060 971 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 SGO1Q5FBB7 561 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 GSPT2Q8IYD1 628 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 MAN1A2O60476 641 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 IMPDH2P12268 514 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 SLC1A1P43005 524 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 MTHFD1LQ6UB35 978 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 ORC4O43929 436 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 GSNP06396 782 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 ODC1P11926 461 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 STILQ15468 1287 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NEDD1Q8NHV4 660 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 RRN3P2A6NIE6 340 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 CFAP99D6REC4 459 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NDUFB10O96000 172 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 GOLGA7BQ2TAP0 167 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 CYP4A22Q5TCH4 519 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 LRRC71Q8N4P6 559 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 MAP3K13O43283 966 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NDUFB5O43674 189 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 STAG3L1P0CL83 205 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 GTF2A2P52657 109 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 ARFIP2P53365 341 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 SKOR1P84550 965 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 EIF2B5Q13144 721 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 GRAMD4Q6IC98 578 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 H2AFY2Q9P0M6 372 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 AMHR2Q16671 573 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 RFFLQ8WZ73 363 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
PTCH1-205ENST00000418258 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
PTCH1-205ENST00000418258 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ACADSBP45954 432 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 FOXO4P98177 505 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 POLD3Q15054 466 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 SARM1Q6SZW1 724 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 FAM180AQ6UWF9 173 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 GUF1Q8N442 669 aaKnown RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 DDX47Q9H0S4 455 aaKnown RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ALG13Q9NP73 1137 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms