RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TOB2Q14106 344 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 MVPQ14764 893 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 TAF7Q15545 349 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 CRB2Q5IJ48 1285 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 ATF7IPQ6VMQ6 1270 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 GLB1L2Q8IW92 636 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 ITPRIPQ8IWB1 547 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 TSPYL6Q8N831 410 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 C8orf58Q8NAV2 365 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 MDGA1Q8NFP4 955 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 SSH1Q8WYL5 1049 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 LARP4BQ92615 738 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 CHFRQ96EP1 664 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 FDXACB1Q9BRP7 624 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 MENTQ9BUN1 341 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 API5Q9BZZ5 524 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 CHMP4BQ9H444 224 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 BABAM1Q9NWV8 329 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 NOB1Q9ULX3 412 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 SORCS3Q9UPU3 1222 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 LRP6O75581 1613 aa4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 KDM6AO15550 1401 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 SOS1Q07889 1333 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 WDR33Q9C0J8 1336 aaKnown RBP4.7□□□□□ -1.66
HMGB3P20-201ENST00000417997 PXDNLA1KZ92 1463 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 ARFGEF2Q9Y6D5 1785 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 A0A087X0B3 334 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 SEC24DO94855 1032 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 CFBP00751 764 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 LPLP06858 475 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 TRIM27P14373 513 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 IL2RBP14784 551 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 GPR15P49685 360 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 GYS2P54840 703 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 CT83Q5H943 113 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 APBB1IPQ7Z5R6 666 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 NOP9Q86U38 636 aaKnown RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 ZNF276Q8N554 614 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 MSL3Q8N5Y2 521 aaKnown RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 UBR7Q8N806 425 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 PPP1R14CQ8TAE6 165 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 CPT1CQ8TCG5 803 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 SLC25A43Q8WUT9 341 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 IL17RAQ96F46 866 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 CHMP4AQ9BY43 222 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 SLKQ9H2G2 1235 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 MIS18AQ9NYP9 233 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 EIF2B4Q9UI10 523 aaKnown RBP4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 DDX19BQ9UMR2 479 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 MAPRE3Q9UPY8 281 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 TNNQ9UQP3 1299 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 TNS2Q63HR2 1409 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 PTPRCP08575 1304 aa4.69□□□□□ -1.66
HMGB3P20-201ENST00000417997 JCADQ9P266 1359 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 ENPP3O14638 875 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 DNAJC6O75061 913 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 SCAF4O95104 1147 aaKnown RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 PHKG2P15735 406 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 INHBCP55103 352 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 DPTQ07507 201 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 STRN3Q13033 797 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 TRIM25Q14258 630 aaKnown RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 UBE3CQ15386 1083 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 KRT24Q2M2I5 525 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 CCDC178Q5BJE1 867 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 CCDC30Q5VVM6 783 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 C1QL3Q5VWW1 255 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 DDX46Q7L014 1031 aaKnown RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 CENPQQ7L2Z9 268 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 TAS1R1Q7RTX1 841 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 RASSF3Q86WH2 238 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 TTC5Q8N0Z6 440 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 SYNE4Q8N205 404 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 GLB1L3Q8NCI6 653 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 IL17REQ8NFR9 667 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 OR14C36Q8NHC7 312 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 ZCRB1Q8TBF4 217 aaKnown RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 CEP89Q96ST8 783 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 IKZF4Q9H2S9 585 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 EVLQ9UI08 416 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 PRSS50Q9UI38 385 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 GLI3P10071 1580 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 ABCC4O15439 1325 aa4.68□□□□□ -1.66
HMGB3P20-201ENST00000417997 NUP188Q5SRE5 1749 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 DISP2A7MBM2 1401 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 A0A087X1B8 175 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 A0A1W2PR48 441 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 NEMP1O14524 444 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 RECQL4O94761 1208 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 PEX11BO96011 259 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 HOXB7P09629 217 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 PTGS2P35354 604 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 ID4P47928 161 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 GZMKP49863 264 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 LGALS4P56470 323 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms