RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CCDC151A5D8V7 595 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 TOMM70O94826 608 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CYP1A1P04798 512 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 UNGP13051 313 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 EIF4BP23588 611 aaKnown RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 GNA15P30679 374 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 TAF2Q6P1X5 1199 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 NOTUMQ6P988 496 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 C7orf31Q8N865 590 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 NOA1Q8NC60 698 aaKnown RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 SPATA4Q8NEY3 305 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 RUBCNQ92622 972 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 ARHGEF26Q96DR7 871 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 HES6Q96HZ4 224 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 ANKZF1Q9H8Y5 726 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 DERAQ9Y315 318 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CLSTN1O94985 981 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CXCR5P32302 372 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 FLT3LGP49771 235 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 BEX3Q00994 111 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CENPCQ03188 943 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 SLC10A6Q3KNW5 377 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 CYP4F22Q6NT55 531 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 TMEM192Q8IY95 271 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 ELMO3Q96BJ8 720 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 VCPIP1Q96JH7 1222 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 MTG1Q9BT17 334 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 AVENQ9NQS1 362 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-205ENST00000417664 ITGA11Q9UKX5 1188 aa17.96■□□□□ 0.47
SSBP3-205ENST00000417664 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
SSBP3-205ENST00000417664 SEPT4O43236 478 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 STAU1O95793 577 aaKnown RBP17.95■□□□□ 0.46
SSBP3-205ENST00000417664 C6orf222P0C671 652 aaPredicted RBP17.95■□□□□ 0.46
SSBP3-205ENST00000417664 P4HA1P13674 534 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
SSBP3-205ENST00000417664 TMEM132DQ14C87 1099 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 CLUL1Q15846 466 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 JADE1Q6IE81 842 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 WDR93Q6P2C0 686 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 C1orf127Q8N9H9 656 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 TRPV1Q8NER1 839 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 HNRNPLLQ8WVV9 542 aaKnown RBP17.95■□□□□ 0.46
SSBP3-205ENST00000417664 TRIB2Q92519 343 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 RPS6KC1Q96S38 1066 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 TSPAN18Q96SJ8 248 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 CFHR5Q9BXR6 569 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 PDCL3Q9H2J4 239 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 UMODL1Q5DID0 1318 aa17.95■□□□□ 0.46
SSBP3-205ENST00000417664 KCNK3O14649 394 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 ERLIN1O75477 346 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 NFICP08651 508 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 NSFP46459 744 aaKnown RBP17.94■□□□□ 0.46
SSBP3-205ENST00000417664 CLCN6P51797 869 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
SSBP3-205ENST00000417664 ZNF667Q5HYK9 610 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 RUFY4Q6ZNE9 571 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 TTC39CQ8N584 583 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 ACTRT1Q8TDG2 376 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 ZNF653Q96CK0 615 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 PSMB7Q99436 277 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 CISHQ9NSE2 258 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 SIX4Q9UIU6 781 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 COG5Q9UP83 839 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 CASP8AP2Q9UKL3 1982 aa17.94■□□□□ 0.46
SSBP3-205ENST00000417664 TREHO43280 583 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ATP8B1O43520 1251 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 RRP9O43818 475 aaKnown RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 LSM8O95777 96 aaKnown RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 RARBP10826 455 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ASPAP45381 313 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 GLE1Q53GS7 698 aaKnown RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 GNASQ5JWF2 1037 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 MCOLN2Q8IZK6 566 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 OSMRQ99650 979 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 BCO2Q9BYV7 579 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ZNF518BQ9C0D4 1074 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 CYP3A43Q9HB55 503 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 GABRQQ9UN88 632 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 PACSIN2Q9UNF0 486 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 THAP12O43422 761 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 KRT19P08727 400 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 RHOXF2BP0C7M4 288 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 YARSP54577 528 aaKnown RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 SP3Q02447 781 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 HIC1Q14526 733 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 SNX17Q15036 470 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 CXorf38Q8TB03 319 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ZNF564Q8TBZ8 553 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ZNF606Q8WXB4 792 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 RHOXF2Q9BQY4 288 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ARHGAP39Q9C0H5 1083 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms