RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 EPB41P11171 864 aaKnown RBP23.16■■□□□ 1.3
HMCES-203ENST00000417226 BRCC3P46736 316 aa23.16■■□□□ 1.3
HMCES-203ENST00000417226 ELAVL2Q12926 359 aaKnown RBP23.16■■□□□ 1.3
HMCES-203ENST00000417226 DUOXA2Q1HG44 320 aa23.16■■□□□ 1.3
HMCES-203ENST00000417226 PARD3BQ8TEW8 1205 aa23.16■■□□□ 1.3
HMCES-203ENST00000417226 NGRNQ9NPE2 291 aaKnown RBP23.16■■□□□ 1.3
HMCES-203ENST00000417226 ANO9A1A5B4 782 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 LRRIQ3A6PVS8 624 aaPredicted RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 URODP06132 367 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 CTSAP10619 480 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 POLR2BP30876 1174 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 DLG4P78352 724 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 SMC1AQ14683 1233 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 BMS1Q14692 1282 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 FAM171A1Q5VUB5 890 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 PDE12Q6L8Q7 609 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 SASS6Q6UVJ0 657 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 INTS8Q75QN2 995 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 CSGALNACT2Q8N6G5 542 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 MKNK1Q9BUB5 465 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 NSUN3Q9H649 340 aaKnown RBP23.15■■□□□ 1.3
HMCES-203ENST00000417226 DACH1Q9UI36 760 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 RWDD2AQ9UIY3 292 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 ITGA11Q9UKX5 1188 aa23.15■■□□□ 1.3
HMCES-203ENST00000417226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.14■■□□□ 1.29
HMCES-203ENST00000417226 HIDE1A8MVS5 230 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 PIRO00625 290 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 C2CD2LO14523 706 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 SLC16A3O15427 465 aaKnown RBP23.14■■□□□ 1.29
HMCES-203ENST00000417226 TRAPPC3O43617 180 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 KRT19P08727 400 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 KRT13P13646 458 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 GLUD2P49448 558 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 CCDC85BQ15834 202 aaPredicted RBP23.14■■□□□ 1.29
HMCES-203ENST00000417226 USP41Q3LFD5 358 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 KIAA1841Q6NSI8 718 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 FOXR2Q6PJQ5 311 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 ADGRD2Q7Z7M1 963 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 CEP57Q86XR8 500 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 TMC2Q8TDI7 906 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 STXBP5LQ9Y2K9 1186 aa23.14■■□□□ 1.29
HMCES-203ENST00000417226 CXCL14O95715 111 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 VAMP7P51809 220 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 BFSP1Q12934 665 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 PTPN14Q15678 1187 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 TCEAL5Q5H9L2 206 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 RTP2Q5QGT7 225 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 USP37Q86T82 979 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 PPM1EQ8WY54 764 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 ZNF516Q92618 1163 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 CEP63Q96MT8 703 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 MRPL17Q9NRX2 175 aaKnown RBP23.13■■□□□ 1.29
HMCES-203ENST00000417226 SIX4Q9UIU6 781 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 AGAP1Q9UPQ3 857 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 XIRP2A4UGR9 3374 aa23.13■■□□□ 1.29
HMCES-203ENST00000417226 SPTBN5Q9NRC6 3674 aaKnown RBP23.13■■□□□ 1.29
HMCES-203ENST00000417226 TRIM49P0CI25 452 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 TRIM49CP0CI26 452 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 TKTP29401 623 aaKnown RBP23.12■■□□□ 1.29
HMCES-203ENST00000417226 LILRA4P59901 499 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 CLDN10P78369 228 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 DSG1Q02413 1049 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 SCARA3Q6AZY7 606 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.12■■□□□ 1.29
HMCES-203ENST00000417226 TRAPPC11Q7Z392 1133 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 MRPL43Q8N983 215 aaKnown RBP23.12■■□□□ 1.29
HMCES-203ENST00000417226 CXorf38Q8TB03 319 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 ZNF560Q96MR9 790 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 TTPALQ9BTX7 342 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 CHST7Q9NS84 486 aa23.12■■□□□ 1.29
HMCES-203ENST00000417226 C2orf71A6NGG8 1288 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 SPTLC1O15269 473 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 AARSP49588 968 aaKnown RBP eCLIP23.11■■□□□ 1.29
HMCES-203ENST00000417226 TAF6P49848 677 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 RBP5P82980 135 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 BIRC3Q13489 604 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 STX1AQ16623 288 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 RBM23Q86U06 439 aaKnown RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 MAFAQ8NHW3 353 aaPredicted RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 RIN2Q8WYP3 895 aaPredicted RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 PPP2R3CQ969Q6 453 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 BORCS6Q96GS4 357 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 SUSD3Q96L08 255 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 MED15Q96RN5 788 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 R3HCC1Q9Y3T6 440 aaKnown RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 TSC2P49815 1807 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 FGFR3P22607 806 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 NFKBIBQ15653 356 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 C1orf220Q5T0J3 134 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 KIAA0319Q5VV43 1072 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 DSTYKQ6XUX3 929 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 SRRTQ9BXP5 876 aaKnown RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 ANO10Q9NW15 660 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 ARMCX3Q9UH62 379 aaPredicted RBP23.11■■□□□ 1.29
HMCES-203ENST00000417226 IRAK3Q9Y616 596 aa23.11■■□□□ 1.29
HMCES-203ENST00000417226 PER2O15055 1255 aa23.1■■□□□ 1.29
HMCES-203ENST00000417226 PNPLA4P41247 253 aa23.1■■□□□ 1.29
HMCES-203ENST00000417226 NRIP1P48552 1158 aa23.1■■□□□ 1.29
HMCES-203ENST00000417226 AP3M2P53677 418 aa23.1■■□□□ 1.29
HMCES-203ENST00000417226 SKOR2Q2VWA4 1001 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms