RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ERP44Q9BS26 406 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 BFARQ9NZS9 450 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 YWHABP31946 246 aaKnown RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 NUDT2P50583 147 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 IGDCC4Q8TDY8 1250 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 GANCQ8TET4 914 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 ATG4AQ8WYN0 398 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TPST1O60507 370 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 DLGAP3O95886 979 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 NME5P56597 212 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 FAM71DQ8N9W8 422 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 MAGEA13PA6NCF6 341 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 SLC1A1P43005 524 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TBL3Q12788 808 aaKnown RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 SNRNP48Q6IEG0 339 aaKnown RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TMBIM4Q9HC24 238 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 TLR2O60603 784 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
UBR4-205ENST00000417040 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 THAP2Q9H0W7 228 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 CARD9Q9H257 536 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 CCDC134Q9H6E4 229 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
UBR4-205ENST00000417040 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
UBR4-205ENST00000417040 S100A5P33763 92 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 KCNJ6P48051 423 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 NUMBP49757 651 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 RMDN1Q96DB5 314 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
UBR4-205ENST00000417040 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ATP6V1E1P36543 226 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 HERVK_113P62684 666 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 CDR2LQ86X02 465 aaPredicted RBP12.63□□□□□ -0.39
UBR4-205ENST00000417040 ORC4O43929 436 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 H2AFXP16104 143 aaPredicted RBP12.63□□□□□ -0.39
UBR4-205ENST00000417040 CIITAP33076 1130 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ACTR2P61160 394 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 CCDC103Q8IW40 242 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 BRD8Q9H0E9 1235 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 LRRC74AQ0VAA2 488 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 KRT72Q14CN4 511 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 SPON2Q9BUD6 331 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 SENP1Q9P0U3 644 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
UBR4-205ENST00000417040 RALAP11233 206 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 STXBP2Q15833 593 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 CCDC142Q17RM4 750 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 THEM5Q8N1Q8 247 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 MCPH1Q8NEM0 835 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 SGSM3Q96HU1 749 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 OSBPL8Q9BZF1 889 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 RSPH10B2B2RC85 870 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 PDXKO00764 312 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 RSPH10BP0C881 870 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 ANTXR2P58335 489 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 LAMB3Q13751 1172 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 SGO1Q5FBB7 561 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
UBR4-205ENST00000417040 SGMS1Q86VZ5 419 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 FLCNQ8NFG4 579 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 DTNAQ9Y4J8 743 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 ATP9AO75110 1047 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 TSC22D2O75157 780 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 PDE5AO76074 875 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 FBXW4P57775 412 aa12.62□□□□□ -0.39
UBR4-205ENST00000417040 ITPRIPL1Q6GPH6 555 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms