RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 COG7P83436 770 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SMAD3P84022 425 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ARF5P84085 180 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PLAURQ03405 335 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PCDH1Q08174 1060 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC173Q0VFZ6 552 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CETN1Q12798 172 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 FSTL1Q12841 308 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MAP3K12Q12852 859 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NR5A1Q13285 461 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NMIQ13287 307 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MPP3Q13368 585 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SNX1Q13596 522 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 LASP1Q14847 261 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 INAQ16352 499 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ATP2B3Q16720 1220 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 IMMTQ16891 758 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DUSP28Q4G0W2 176 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 XKR9Q5GH70 373 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TOR2AQ5JU69 321 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NOL9Q5SY16 702 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DEPDC1Q5TB30 811 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MBNL2Q5VZF2 373 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 AP1ARQ63HQ0 302 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MCTP1Q6DN14 999 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SULT6B1Q6IMI4 303 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT80Q6KB66 452 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP4F22Q6NT55 531 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DRICH1Q6PGQ1 229 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP20A1Q6UW02 462 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 C15orf52Q6ZUT6 534 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CDC37L1Q7L3B6 337 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 UBE3BQ7Z3V4 1068 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT25Q7Z3Z0 450 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SZRD1Q7Z422 152 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 LRRC49Q8IUZ0 686 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM192Q8IY95 271 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ULK2Q8IYT8 1036 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 C17orf53Q8N3J3 647 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TTC39CQ8N584 583 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PPM1NQ8N819 430 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ANKRD53Q8N9V6 530 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 KIF18AQ8NI77 898 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CEP76Q8TAP6 659 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP2W1Q8TAV3 490 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SPATA20Q8TB22 786 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC110Q8TBZ0 833 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 STT3BQ8TCJ2 826 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CCHCR1Q8TD31 782 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SH3RF3Q8TEJ3 882 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.38□□□□□ -1.874e-14■■□□□ 13.8
CTDSPL-203ENST00000416688 BSNDQ8WZ55 320 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 WASF1Q92558 559 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ANKS1AQ92625 1134 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ELMO3Q96BJ8 720 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 IQCDQ96DY2 449 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF125Q96EQ8 232 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PLPPR2Q96GM1 343 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RAX2Q96IS3 184 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 EPSTI1Q96J88 318 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RBM14Q96PK6 669 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TXN2Q99757 166 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TCF25Q9BQ70 676 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 BOCQ9BWV1 1114 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 LGR4Q9BXB1 951 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 FUT8Q9BYC5 575 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC6A16Q9GZN6 736 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PRDM13Q9H4Q3 707 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PCIF1Q9H4Z3 704 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NOD2Q9HC29 1040 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM8AQ9HCN3 771 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PDE11AQ9HCR9 933 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DDX4Q9NQI0 724 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NECTIN3Q9NQS3 549 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 POLE3Q9NRF9 147 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ZBTB40Q9NUA8 1239 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 H2AFY2Q9P0M6 372 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PI4KBQ9UBF8 816 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TEKT2Q9UIF3 430 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SERPINB13Q9UIV8 391 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TSPYL4Q9UJ04 414 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CNPY2Q9Y2B0 182 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 WDR37Q9Y2I8 494 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 HIF3AQ9Y2N7 669 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CCL27Q9Y4X3 112 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NR2E3Q9Y5X4 410 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP46A1Q9Y6A2 500 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC30A1Q9Y6M5 507 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RGSL1A5PLK6 1076 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM177BA6PVY3 158 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 A8MXE2 369 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 LACTBL1A8MY62 500 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CHURC1-FNTBB4DL54 471 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GPR89AB7ZAQ6 455 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 H0YAE9 185 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms