RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 COLEC11Q9BWP8 271 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 MTMR12Q9C0I1 747 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 CITO14578 2027 aa13.76□□□□□ -0.21
YIPF3-203ENST00000416380 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 B3GAT3O94766 335 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 LTBRP36941 435 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 CCDC183Q5T5S1 534 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
YIPF3-203ENST00000416380 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 MKNK1Q9BUB5 465 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 MYO7AQ13402 2215 aa13.75□□□□□ -0.21
YIPF3-203ENST00000416380 PSMA7O14818 248 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 SLC16A3O15427 465 aaKnown RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 ADAM12O43184 909 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 LRRN2O75325 713 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 GLP2RO95838 553 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 FOSL2P15408 326 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 PPP1R2P41236 205 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 MARSP56192 900 aaKnown RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 STX17P56962 302 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 KRT17Q04695 432 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 PAK1Q13153 545 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 ZACNQ401N2 412 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 BEST2Q8NFU1 509 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 FEZF2Q8TBJ5 459 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 HSD3B7Q9H2F3 369 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 NGRNQ9NPE2 291 aaKnown RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 CTNND2Q9UQB3 1225 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.74□□□□□ -0.21
YIPF3-203ENST00000416380 C5orf42Q9H799 3197 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
YIPF3-203ENST00000416380 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■■ 113.6
YIPF3-203ENST00000416380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 IKBKBO14920 756 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 TADA2AO75478 443 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 PAPLNO95428 1278 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 ITGB3P05106 788 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 CNPP09543 421 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 TRIM49P0CI25 452 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 TRIM49CP0CI26 452 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 TKTP29401 623 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 POLR2BP30876 1174 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 PSMC2P35998 433 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 TFAMQ00059 246 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 BFSP1Q12934 665 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 SURF1Q15526 300 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 DUSP6Q16828 381 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 LILRA6Q6PI73 481 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 C11orf57Q6ZUT1 292 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 FAM186BQ8IYM0 893 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 SLC22A17Q8WUG5 538 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 SLC35C1Q96A29 364 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 CEP63Q96MT8 703 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 KLHL5Q96PQ7 755 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
YIPF3-203ENST00000416380 ITGA11Q9UKX5 1188 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
YIPF3-203ENST00000416380 CETN3O15182 167 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 LINC01565O15544 149 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CLASP2O75122 1294 aaKnown RBP13.72□□□□□ -0.21
YIPF3-203ENST00000416380 OAZ2O95190 189 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 VNN2O95498 520 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CXCL14O95715 111 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CYP11A1P05108 521 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
YIPF3-203ENST00000416380 IGFBP4P22692 258 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 RPL13P26373 211 aaKnown RBP13.72□□□□□ -0.21
YIPF3-203ENST00000416380 VAMP7P51809 220 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 ADAM15Q13444 863 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 NCAPHQ15003 741 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 PTPROQ16827 1216 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CT47A1Q5JQC4 288 aaPredicted RBP13.72□□□□□ -0.21
YIPF3-203ENST00000416380 PLPP4Q5VZY2 271 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
YIPF3-203ENST00000416380 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms