RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ELMSAN1Q6PJG2 1045 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 ELOA2Q8IYF1 753 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 XXYLT1Q8NBI6 393 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 FBXL18Q96ME1 805 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 C1QTNF1Q9BXJ1 281 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 DZANK1Q9NVP4 752 aa19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 PDCD11Q14690 1871 aaKnown RBP19.51■□□□□ 0.71
SEMA3B-201ENST00000416295 I3L4J1 428 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 CLIC2O15247 247 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 C1RP00736 705 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 CYP2J2P51589 502 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 CLCN4P51793 760 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 SMAD4Q13485 552 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 PSMD5Q16401 504 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 ANKRD54Q6NXT1 300 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 PRSS55Q6UWB4 352 aaPredicted RBP19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 ANKS3Q6ZW76 656 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 EFCAB13Q8IY85 973 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 SMRP1Q8NCR6 262 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 SLC22A17Q8WUG5 538 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 CACTINQ8WUQ7 758 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 SUSD3Q96L08 255 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 GSDMAQ96QA5 445 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 GTPBP4Q9BZE4 634 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 DPP7Q9UHL4 492 aa19.5■□□□□ 0.71
SEMA3B-201ENST00000416295 GRXCR2A6NFK2 248 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 TULP1O00294 542 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 PDXKO00764 312 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 GLUD1P00367 558 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 EPCAMP16422 314 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 TKTP29401 623 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 GUCY2FP51841 1108 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 TFAMQ00059 246 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 CLUL1Q15846 466 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 SNRNP35Q16560 246 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 C9orf57Q5W0N0 161 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 CBWD2Q8IUF1 395 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 GUF1Q8N442 669 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 LNX1Q8TBB1 728 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 SMARCE1Q969G3 411 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 KCTD10Q9H3F6 313 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 TSHZ2Q9NRE2 1034 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 DPP3Q9NY33 737 aa19.49■□□□□ 0.71
SEMA3B-201ENST00000416295 ANO9A1A5B4 782 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 AARSP49588 968 aaKnown RBP eCLIP19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 CLEC17AQ6ZS10 378 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 APPL2Q8NEU8 664 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 TMEM174Q8WUU8 243 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 PDE11AQ9HCR9 933 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 PCDHB8Q9UN66 801 aa19.48■□□□□ 0.71
SEMA3B-201ENST00000416295 ARHGEF37A1IGU5 675 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 PIRO00625 290 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 MBTPS2O43462 519 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 CALUO43852 315 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 EXOC3O60645 756 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 RPL17P18621 184 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 WNT7BP56706 349 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 SLC9A9Q8IVB4 645 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 TMEM130Q8N3G9 435 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 MTRRQ9UBK8 725 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 TRAF3IP3Q9Y228 551 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 PCDHA5Q9Y5H7 936 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 BACE2Q9Y5Z0 518 aa19.47■□□□□ 0.71
SEMA3B-201ENST00000416295 H7C4K7 107 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 M0QZQ0 153 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 PRPF40AO75400 957 aaKnown RBP19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 TMEM191BP0C7N4 346 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 PNPLA4P41247 253 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 LILRA4P59901 499 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ITIH3Q06033 890 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 CYP24A1Q07973 514 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 MYBPC2Q14324 1141 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 PSMD6Q15008 389 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 SMAD2Q15796 467 aaKnown RBP19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 VARS2Q5ST30 1063 aaKnown RBP19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ZNF658Q5TYW1 1059 aaPredicted RBP19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 SYCE2Q6PIF2 218 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 DSTYKQ6XUX3 929 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 WDR49Q8IV35 697 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 RDH13Q8NBN7 331 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ANKRD36BP1Q96IX9 119 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ZNF560Q96MR9 790 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 FNBP1Q96RU3 617 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 CLSTN3Q9BQT9 956 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 SFXN1Q9H9B4 322 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 MAN1C1Q9NR34 630 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ITGA11Q9UKX5 1188 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 MAPK8IP1Q9UQF2 711 aa19.46■□□□□ 0.71
SEMA3B-201ENST00000416295 ANK1P16157 1881 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 PPEF2O14830 753 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 TGM5O43548 720 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 NR3C1P04150 777 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 IL9P15248 144 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 TAF6P49848 677 aa19.45■□□□□ 0.7
SEMA3B-201ENST00000416295 COBLL1Q53SF7 1204 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms