RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CYP3A5P20815 502 aa15.65■□□□□ 0.1
SGCE-202ENST00000415788 RNASELQ05823 741 aaKnown RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 BRD3Q15059 726 aa15.65■□□□□ 0.1
SGCE-202ENST00000415788 JADE1Q6IE81 842 aa15.65■□□□□ 0.1
SGCE-202ENST00000415788 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 CNOT6LQ96LI5 555 aaKnown RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 ZMAT2Q96NC0 199 aaKnown RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 FAM193BQ96PV7 902 aaPredicted RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
SGCE-202ENST00000415788 BAG1Q99933 345 aaPredicted RBP15.65■□□□□ 0.1
SGCE-202ENST00000415788 PCDHA11Q9Y5I1 949 aa15.65■□□□□ 0.1
SGCE-202ENST00000415788 COL4A6Q14031 1691 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 CCDC151A5D8V7 595 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 POLR3GO15318 223 aaPredicted RBP15.64■□□□□ 0.09
SGCE-202ENST00000415788 DLATP10515 647 aaKnown RBP15.64■□□□□ 0.09
SGCE-202ENST00000415788 TNNI1P19237 187 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 EEF1GP26641 437 aaKnown RBP15.64■□□□□ 0.09
SGCE-202ENST00000415788 GATMP50440 423 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 AFF1P51825 1210 aaKnown RBP15.64■□□□□ 0.09
SGCE-202ENST00000415788 SPAG1Q07617 926 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 TUBB2AQ13885 445 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 ZBTB6Q15916 424 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 DUOXA2Q1HG44 320 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 GLRA4Q5JXX5 417 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 CDKAL1Q5VV42 579 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 BEST2Q8NFU1 509 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 TUBB2BQ9BVA1 445 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 SAMSN1Q9NSI8 373 aaKnown RBP15.64■□□□□ 0.09
SGCE-202ENST00000415788 FANCLQ9NW38 375 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 MIOSQ9NXC5 875 aa15.64■□□□□ 0.09
SGCE-202ENST00000415788 TNNC2P02585 160 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 NFICP08651 508 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 GTF2H1P32780 548 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 GNG11P61952 73 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 DSC1Q08554 894 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 TUSC3Q13454 348 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 PAN2Q504Q3 1202 aaKnown RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 TRIM59Q8IWR1 403 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 EFCAB13Q8IY85 973 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 FIBCD1Q8N539 461 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 ANKRD20A12PQ8NF67 263 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 ANKRD36BP1Q96IX9 119 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 UROC1Q96N76 676 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 INTS13Q9NVM9 706 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 PLAGL2Q9UPG8 496 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 PDE4DIPQ5VU43 2346 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 LRRIQ3A6PVS8 624 aaPredicted RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 KCNJ18B7U540 433 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 TULP1O00294 542 aaPredicted RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 FANCGO15287 622 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 SEC31AO94979 1220 aaKnown RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 TMEM191BP0C7N4 346 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 WNT7BP56706 349 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 KCNJ12Q14500 433 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 NAB2Q15742 525 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 RAB30Q15771 203 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 TCERG1LQ5VWI1 586 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 DDX27Q96GQ7 796 aaKnown RBP15.63■□□□□ 0.09
SGCE-202ENST00000415788 TMEM175Q9BSA9 504 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 CXCL16Q9H2A7 254 aa15.63■□□□□ 0.09
SGCE-202ENST00000415788 SASH3O75995 380 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 ZNF18P17022 549 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
SGCE-202ENST00000415788 TCP11X2Q5H9J9 407 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 DCAF17Q5H9S7 520 aaPredicted RBP15.62■□□□□ 0.09
SGCE-202ENST00000415788 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
SGCE-202ENST00000415788 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 FEZ2Q9UHY8 353 aaPredicted RBP15.62■□□□□ 0.09
SGCE-202ENST00000415788 ITGA11Q9UKX5 1188 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 RWDD3Q9Y3V2 267 aa15.62■□□□□ 0.09
SGCE-202ENST00000415788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.62■□□□□ 0.09
SGCE-202ENST00000415788 LAG3P18627 525 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 MTIF2P46199 727 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 DLG4P78352 724 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 SMAD3P84022 425 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 COLGALT2Q8IYK4 626 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 NEK11Q8NG66 645 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 POP1Q99575 1024 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 FUT8Q9BYC5 575 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 PARD6BQ9BYG5 372 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 MTMR12Q9C0I1 747 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 NRDE2Q9H7Z3 1164 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 AAASQ9NRG9 546 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 DPP3Q9NY33 737 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 MSRAQ9UJ68 235 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 RALGAPA2Q2PPJ7 1873 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 GRXCR1A8MXD5 290 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 N4BP1O75113 896 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 DDHD2O94830 711 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 LRPAP1P30533 357 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 ALDH7A1P49419 539 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 RABGGTBP53611 331 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 PTPRJQ12913 1337 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 MAN2A1Q16706 1144 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 C1orf220Q5T0J3 134 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms