RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PTGISQ16647 500 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 DAB2IPQ5VWQ8 1189 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 MMS22LQ6ZRQ5 1243 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 TRIM50Q86XT4 487 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 CCDC50Q8IVM0 306 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 EPB41L4BQ9H329 900 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 LRRC19Q9H756 370 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 LRRC4CQ9HCJ2 640 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 A0A0G2JLL6 359 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 TRIM66O15016 1216 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 TOM1L1O75674 476 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 ARIH2O95376 493 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 SHBGP04278 402 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 NUDT17P0C025 328 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 PPP2R2AP63151 447 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 KRT17Q04695 432 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 IER5Q5VY09 327 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 PRRT2Q7Z6L0 340 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 WDR49Q8IV35 697 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
UBA3-203ENST00000415609 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
UBA3-203ENST00000415609 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 MSCO60682 206 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 PRKCBP05771 671 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 FGFR4P22455 802 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 GJC1P36383 396 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 SSR1P43307 286 aaKnown RBP13.16□□□□□ -0.3
UBA3-203ENST00000415609 AP3M2P53677 418 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 SCARA3Q6AZY7 606 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
UBA3-203ENST00000415609 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
UBA3-203ENST00000415609 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
UBA3-203ENST00000415609 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 GPR20Q99678 358 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 MTMR12Q9C0I1 747 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 ADARB2Q9NS39 739 aaKnown RBP13.16□□□□□ -0.3
UBA3-203ENST00000415609 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
UBA3-203ENST00000415609 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 E7EVH7 732 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CAND2O75155 1236 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CNMDO75829 334 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CD58P19256 250 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 SEC24CP53992 1094 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 MAMLD1Q13495 774 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 SLC29A2Q14542 456 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 MAPK6Q16659 721 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CDCA2Q69YH5 1023 aaPredicted RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 PPP1R2P3Q6NXS1 205 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CCDC25Q86WR0 208 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 ART4Q93070 314 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 ASIC3Q9UHC3 531 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 SLC12A6Q9UHW9 1150 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 OGTO15294 1046 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 FAM189A1O60320 539 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 SLC25A27O95847 323 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 ASS1P00966 412 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 TMOD1P28289 359 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 MAN1A1P33908 653 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 MYL6P60660 151 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 IRX5P78411 483 aaPredicted RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 TMEM132AQ24JP5 1023 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 CELF3Q5SZQ8 465 aaKnown RBP13.15□□□□□ -0.3
UBA3-203ENST00000415609 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 NLRP14Q86W24 1093 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
UBA3-203ENST00000415609 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms