RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SLC38A7Q9NVC3 462 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 STK24Q9Y6E0 443 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 MORC2Q9Y6X9 1032 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TCHHQ07283 1943 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 YKT6O15498 198 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 HNRNPLP14866 589 aaKnown RBP eCLIP6.81□□□□□ -1.321e-6■■■■■ 45.1
LMBR1-204ENST00000415428 EIF2S3P41091 472 aaKnown RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 PSEN1P49768 467 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 CLCN3P51790 818 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 UCNP55089 124 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 E2F5Q15329 346 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 ITPRIPL2Q3MIP1 535 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 IL27RAQ6UWB1 636 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 PLA2G4DQ86XP0 818 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 FAM9BQ8IZU0 186 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 HIC2Q96JB3 615 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 ZNF577Q9BSK1 485 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 HEBP1Q9NRV9 189 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 FBXO10Q9UK96 956 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 SLC6A14Q9UN76 642 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TNFSF13BQ9Y275 285 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 WDFY4Q6ZS81 3184 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 A0A087WZ62 844 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 A0A1W2PQD8 194 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 FAM189A1O60320 539 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 ZC3H11AO75152 810 aaKnown RBP eCLIP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 KIF4AO95239 1232 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 DGKEP52429 567 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 TEAD4Q15561 434 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 FDXACB1Q9BRP7 624 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 ZCWPW1Q9H0M4 648 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 MINDY3Q9H8M7 445 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 GABBR1Q9UBS5 961 aa6.81□□□□□ -1.32
LMBR1-204ENST00000415428 SEPT9Q9UHD8 586 aaPredicted RBP6.81□□□□□ -1.32
LMBR1-204ENST00000415428 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 HOXC11O43248 304 aaPredicted RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 P4HBP07237 508 aaKnown RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 TUBP50607 506 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 PTH1RQ03431 593 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 NBR1Q14596 966 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 LIN9Q5TKA1 542 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 AUTS2Q8WXX7 1259 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 SPATA17Q96L03 361 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 HEPACAM2A8MVW5 462 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 TRAPPC3O43617 180 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 F11P03951 625 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 WEE2P0C1S8 567 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 CDC25CP30307 473 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ROR1Q01973 937 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ARID5BQ14865 1188 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 UBXN2BQ14CS0 331 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ELF2Q15723 593 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 PTPRNQ16849 979 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 CTCFLQ8NI51 663 aaPredicted RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 TMEM209Q96SK2 561 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 LSG1Q9H089 658 aaKnown RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 SENP2Q9HC62 589 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 RTEL1Q9NZ71 1219 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 CEP72Q9P209 647 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 DGAT1O75907 488 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ABCD1P33897 745 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 CSRP3P50461 194 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 SF3A2Q15428 464 aaKnown RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 JAKMIP3Q5VZ66 844 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 APBB1IPQ7Z5R6 666 aaPredicted RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 OTUD7AQ8TE49 926 aaPredicted RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 PSPC1Q8WXF1 523 aaKnown RBP6.8□□□□□ -1.32
LMBR1-204ENST00000415428 OTUB2Q96DC9 234 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ZBTB10Q96DT7 871 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 LRRC3BQ96PB8 259 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 EPAS1Q99814 870 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 USP29Q9HBJ7 922 aa6.8□□□□□ -1.32
LMBR1-204ENST00000415428 ZNF638Q14966 1978 aaKnown RBP6.79□□□□□ -1.32
LMBR1-204ENST00000415428 ANO9A1A5B4 782 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 K7EQS6 105 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 SEC24AO95486 1093 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 MAGEA11P43364 429 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 KIR2DL1P43626 348 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-204ENST00000415428 NOVA1P51513 510 aaKnown RBP6.79□□□□□ -1.32
LMBR1-204ENST00000415428 SLC7A9P82251 487 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 COL28A1Q2UY09 1125 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 OSCP1Q8WVF1 389 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 TBATAQ96M53 351 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 KXD1Q9BQD3 176 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 POLR3CQ9BUI4 534 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-204ENST00000415428 DPH1Q9BZG8 443 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 FAM124BQ9H5Z6 455 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-204ENST00000415428 BRD9Q9H8M2 597 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 TUFT1Q9NNX1 390 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 TMEM131Q92545 1883 aa6.79□□□□□ -1.32
LMBR1-204ENST00000415428 SPAG17Q6Q759 2223 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms