RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 KIAA1211Q6ZU35 1233 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 STRADAQ7RTN6 431 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 PRRT2Q7Z6L0 340 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 GLRX5Q86SX6 157 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 TMEM200AQ86VY9 491 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 IFNLR1Q8IU57 520 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 ZDHHC13Q8IUH4 622 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 RNF168Q8IYW5 571 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 IL22RA1Q8N6P7 574 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 SLC4A11Q8NBS3 891 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 RBBP8NLQ8NC74 664 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 FBXO27Q8NI29 283 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CTCFLQ8NI51 663 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 ITLN2Q8WWU7 325 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 SLC7A3Q8WY07 619 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 ZNF516Q92618 1163 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CNKSR1Q969H4 720 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 RNF183Q96D59 192 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 DDX11Q96FC9 970 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 LINGO1Q96FE5 620 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 FUBP3Q96I24 572 aaKnown RBP eCLIP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 TRIM47Q96LD4 638 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 NUP88Q99567 741 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CITED1Q99966 193 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 TRIM56Q9BRZ2 755 aaKnown RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 FUCA2Q9BTY2 467 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 TRAF4Q9BUZ4 470 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 MFRPQ9BY79 579 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 AGXT2Q9BYV1 514 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 SHARPINQ9H0F6 387 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CDC42EP4Q9H3Q1 356 aaKnown RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 DENND2DQ9H6A0 471 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 DDX31Q9H8H2 851 aaKnown RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 GBA2Q9HCG7 927 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CCDC87Q9NVE4 849 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 SPATA6Q9NWH7 488 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 VPS18Q9P253 973 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 RCC2Q9P258 522 aaKnown RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 KIAA1468Q9P260 1216 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 CACNG5Q9UF02 275 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 KCND3Q9UK17 655 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 EDARQ9UNE0 448 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 COG6Q9Y2V7 657 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 PCDHGC4Q9Y5F7 938 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 INO80Q9ULG1 1556 aaPredicted RBP-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 IGSF9BQ9UPX0 1349 aa-0.67□□□□□ -2.52
SNX3P1X-201ENST00000414887 BCORQ6W2J9 1755 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 MTCL1Q9Y4B5 1905 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 URB2Q14146 1524 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 A0A0J9YXV3 536 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 A0A1B0GW55 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 PRAMEF22A3QJZ6 481 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 YDJCA8MPS7 323 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 FAM166BA8MTA8 275 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 TISP43B9A030 160 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 C9IYK1 514 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 F8W810 466 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 LGALS9O00182 355 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 PODXLO00592 558 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 FCHO1O14526 889 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 WDR46O15213 610 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 TGFB1I1O43294 461 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 XRCC3O43542 346 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 PRC1O43663 620 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 RAB11FIP3O75154 756 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 SEMA3DO95025 777 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 BAG4O95429 457 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 LDOC1O95751 146 aaPredicted RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 WNT11O96014 354 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 C1RP00736 705 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 TP53P04637 393 aaPredicted RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 CA3P07451 260 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 POU2F2P09086 479 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 ZGLP1P0C6A0 271 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 DUX4L2P0CJ85 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 DUX4L3P0CJ86 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 DUX4L5P0CJ88 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 DUX4L6P0CJ89 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 DUX4L7P0CJ90 424 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 HKR1P10072 659 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 MMP9P14780 707 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 CNR2P34972 360 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 PCGF2P35227 344 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 ADMP35318 185 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 CTSOP43234 321 aaPredicted RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 GALK1P51570 392 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 POLE2P56282 527 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 STARD6P59095 220 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 NANOS3P60323 173 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 ASIC1P78348 528 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 CSNK1G2P78368 415 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 TFAP4Q01664 338 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 FPGSQ05932 587 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 MGAT3Q09327 533 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 MYO1EQ12965 1108 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 KCNAB2Q13303 367 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 CAPRIN1Q14444 709 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 HYAL4Q2M3T9 481 aa-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 PAN3Q58A45 887 aaKnown RBP-0.68□□□□□ -2.52
SNX3P1X-201ENST00000414887 Q5VV11 94 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms