RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ASPAP45381 313 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 PPP2R2AP63151 447 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 SETQ01105 290 aaPredicted RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 PPFIA1Q13136 1202 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 PLCB4Q15147 1175 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 LRCH2Q5VUJ6 765 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 MCTP2Q6DN12 878 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 GALNT17Q6IS24 598 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 MFSD5Q6N075 450 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 LYPD4Q6UWN0 246 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 C16orf59Q7L2K0 433 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 NIPA1Q7RTP0 329 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 ADAT2Q7Z6V5 191 aaKnown RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 NEK8Q86SG6 692 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 THNSL2Q86YJ6 484 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 JAMLQ86YT9 394 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 CCDC60Q8IWA6 550 aaPredicted RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS41-205ENST00000414632 TDHQ8IZJ6 230 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 FMR1NBQ8N0W7 255 aaPredicted RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 CHAC2Q8WUX2 184 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 SEPT1Q8WYJ6 367 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 ATP6V0A1Q93050 837 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 AARSD1Q9BTE6 412 aaKnown RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 LGR4Q9BXB1 951 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 UNC45AQ9H3U1 944 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 SSU72Q9NP77 194 aaKnown RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 APEX2Q9UBZ4 518 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 DDX25Q9UHL0 483 aaKnown RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 ZNF215Q9UL58 517 aaPredicted RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 NFASCO94856 1347 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 EMSYQ7Z589 1322 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 NLRC5Q86WI3 1866 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 KIAA1671Q9BY89 1806 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 TMEM150BA6NC51 233 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 GRXCR1A8MXD5 290 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 MAFGO15525 162 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 PARNO95453 639 aaKnown RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 PDGFRBP09619 1106 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 SUPT20HL2P0C7V6 817 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 CKBP12277 381 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 INSRRP14616 1297 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 HOXB4P17483 251 aaPredicted RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 CIITAP33076 1130 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 BMP8BP34820 402 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 THPOP40225 353 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 DGKGP49619 791 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 FXR1P51114 621 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS41-205ENST00000414632 STAT5BP51692 787 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 USP11P51784 963 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 HMGN5P82970 282 aaKnown RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 TMEM62Q0P6H9 643 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 PPIGQ13427 754 aaKnown RBP eCLIP5.47□□□□□ -1.538e-9■□□□□ 9.9
VPS41-205ENST00000414632 SAFBQ15424 915 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS41-205ENST00000414632 GRIK4Q16099 956 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 UGCGQ16739 394 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 TCTN1Q2MV58 587 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 Q4G0T1 1027 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF618Q5T7W0 954 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 FAM109BQ6ICB4 259 aaPredicted RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 SWSAP1Q6NVH7 229 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ABHD15Q6UXT9 468 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF365Q70YC5 407 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 OTOP2Q7RTS6 562 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 MIER3Q7Z3K6 550 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 FERMT3Q86UX7 667 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 SESTD1Q86VW0 696 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF227Q86WZ6 799 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 TEX2Q8IWB9 1127 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 SMYD4Q8IYR2 804 aaPredicted RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 TMEM199Q8N511 208 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 UBR7Q8N806 425 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 SLC5A5Q92911 643 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 VWCEQ96DN2 955 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 MBOAT7Q96N66 472 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 CLUHP3Q96NS8 147 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 PPP1R16BQ96T49 567 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 LLPHQ9BRT6 129 aaKnown RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 TEKT3Q9BXF9 490 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 FOXQ1Q9C009 403 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 FAM49AQ9H0Q0 323 aaPredicted RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 SMARCAD1Q9H4L7 1026 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 AZI2Q9H6S1 392 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 IL23AQ9NPF7 189 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF302Q9NR11 478 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 TBC1D22BQ9NU19 505 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ERAP1Q9NZ08 941 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 GABBR1Q9UBS5 961 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 G3BP2Q9UN86 482 aaKnown RBP5.47□□□□□ -1.53
VPS41-205ENST00000414632 ATP8A1Q9Y2Q0 1164 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 ZNF451Q9Y4E5 1061 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 REV3LO60673 3130 aa5.47□□□□□ -1.53
VPS41-205ENST00000414632 COL4A4P53420 1690 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms