RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 EPHB6O15197 1021 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
DDB1-202ENST00000414411 WNT7BP56706 349 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 TUBB4BP68371 445 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 CC2D1AQ6P1N0 951 aaPredicted RBP10.73□□□□□ -0.69
DDB1-202ENST00000414411 AGMOQ6ZNB7 445 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 KIAA1328Q86T90 577 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 BRSK2Q8IWQ3 736 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 FAM186BQ8IYM0 893 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 JAKMIP2Q96AA8 810 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 ACAP3Q96P50 834 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 PARD6BQ9BYG5 372 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 CXCL16Q9H2A7 254 aa10.73□□□□□ -0.69
DDB1-202ENST00000414411 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
DDB1-202ENST00000414411 FAM207AQ9NSI2 230 aaPredicted RBP10.73□□□□□ -0.69
DDB1-202ENST00000414411 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 KRT86O43790 486 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 FGBP02675 491 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 CXCL8P10145 99 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 AKAP5P24588 427 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 CLDN10P78369 228 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 GABPB1Q06547 395 aaPredicted RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 ENPEPQ07075 957 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 TMEM240Q5SV17 173 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 C1orf220Q5T0J3 134 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
DDB1-202ENST00000414411 ZNF365Q70YC5 407 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 INTS8Q75QN2 995 aaKnown RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 TRIM59Q8IWR1 403 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 PARD3BQ8TEW8 1205 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 PLEKHA5Q9HAU0 1116 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 METTL14Q9HCE5 456 aaKnown RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 TMEM161AQ9NX61 479 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 RBAKQ9NYW8 714 aaPredicted RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 ARMCX3Q9UH62 379 aaPredicted RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 MYO6Q9UM54 1294 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 TFR2Q9UP52 801 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 CCDC151A5D8V7 595 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 RCCD1A6NED2 376 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 LACTBL1A8MY62 500 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 INPPL1O15357 1258 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 EFCAB14O75071 495 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 RECQL4O94761 1208 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 ITGA4P13612 1032 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 VAV2P52735 878 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 DMTNQ08495 405 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 PSMD6Q15008 389 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 TRAPPC11Q7Z392 1133 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 BAP1Q92560 729 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 LPPQ93052 612 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 SLC35C1Q96A29 364 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 PGBD4Q96DM1 585 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.696e-8■□□□□ 9.7
DDB1-202ENST00000414411 LACRTQ9GZZ8 138 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 ASB7Q9H672 318 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 MMRN2Q9H8L6 949 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 ANKZF1Q9H8Y5 726 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 RPF1Q9H9Y2 349 aaKnown RBP10.72□□□□□ -0.69
DDB1-202ENST00000414411 PDE11AQ9HCR9 933 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 GIT1Q9Y2X7 761 aa10.72□□□□□ -0.69
DDB1-202ENST00000414411 CTAGE15A4D2H0 777 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 ZNF263O14978 683 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 PLEKP08567 350 aaPredicted RBP10.71□□□□□ -0.69
DDB1-202ENST00000414411 CTAGE8P0CG41 777 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 ACTN1P12814 892 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 KCNE1P15382 129 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 VAMP7P51809 220 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
DDB1-202ENST00000414411 DLG4P78352 724 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 BFSP1Q12934 665 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 ZBTB6Q15916 424 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 OTOP2Q7RTS6 562 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CTAGE6Q86UF2 777 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CD302Q8IX05 232 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CTAGE4Q8IX94 777 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 HACE1Q8IYU2 909 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 TOP1MTQ969P6 601 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 SNX27Q96L92 541 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CCDC42Q96M95 316 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 LBHD1Q9BQE6 289 aaPredicted RBP10.71□□□□□ -0.69
DDB1-202ENST00000414411 APOL6Q9BWW8 343 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 EDEM3Q9BZQ6 932 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 ARFGAP3Q9NP61 516 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 TOPORSQ9NS56 1045 aaPredicted RBP10.71□□□□□ -0.69
DDB1-202ENST00000414411 RNF19AQ9NV58 838 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 CNTN3Q9P232 1028 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 ARHGAP20Q9P2F6 1191 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 PARP2Q9UGN5 583 aa10.71□□□□□ -0.69
DDB1-202ENST00000414411 SMIM28A0A1B0GU29 152 aa10.7□□□□□ -0.7
DDB1-202ENST00000414411 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
DDB1-202ENST00000414411 LRRC53A6NM62 1247 aa10.7□□□□□ -0.7
DDB1-202ENST00000414411 ZMYND10O75800 440 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms