RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
NCKIPSD-202ENST00000413374 H7C4K7 107 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 PPP1R37O75864 691 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 LRPAP1P30533 357 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 ELF1P32519 619 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 ABCD1P33897 745 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 ROR1Q01973 937 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 SPATA1Q5VX52 437 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 GET4Q7L5D6 327 aaPredicted RBP11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZDHHC14Q8IZN3 488 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 HVCN1Q96D96 273 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 FAM84AQ96KN4 292 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 SUSD3Q96L08 255 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 MYADMQ96S97 322 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 LRRC27Q9C0I9 530 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 TNMDQ9H2S6 317 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 KBTBD4Q9NVX7 518 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZDHHC7Q9NXF8 308 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 SERTAD1Q9UHV2 236 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 FBXL5Q9UKA1 691 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 STYXL1Q9Y6J8 313 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 CLUHO75153 1309 aa11.05□□□□□ -0.64
NCKIPSD-202ENST00000413374 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SYN3O14994 580 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SPTLC1O15269 473 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 XPOTO43592 962 aaKnown RBP11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SEC24AO95486 1093 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 ADRB2P07550 413 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 OR4Q2P0C623 313 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 CYP3A5P20815 502 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 FSHRP23945 695 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 WNT7BP56706 349 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 AMPD3Q01432 767 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 MRPL58Q14197 206 aaKnown RBP11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 POSTNQ15063 836 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 RESP18Q5W5W9 173 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SCARA3Q6AZY7 606 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 ATL3Q6DD88 541 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 CD302Q8IX05 232 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 NELFCDQ8IXH7 590 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 APPL2Q8NEU8 664 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 CBWD1Q9BRT8 395 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 CYP4F11Q9HBI6 524 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 HCFC1R1Q9NWW0 138 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 SORCS3Q9UPU3 1222 aa11.04□□□□□ -0.64
NCKIPSD-202ENST00000413374 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 PRRG1O14668 218 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 NARSO43776 548 aaKnown RBP11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 TBC1D4O60343 1298 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 C1RP00736 705 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 CPB1P15086 417 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 TFAMQ00059 246 aaKnown RBP11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 YWHAHQ04917 246 aaPredicted RBP11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 SIGLEC14Q08ET2 396 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 CUL4BQ13620 913 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 C9orf57Q5W0N0 161 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 SLC8B1Q6J4K2 584 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZNF280DQ6N043 979 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ARMCX5Q6P1M9 558 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 CYP26C1Q6V0L0 522 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 USP37Q86T82 979 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 EFCAB13Q8IY85 973 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ZNF461Q8TAF7 563 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ITFG1Q8TB96 612 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 LEO1Q8WVC0 666 aaPredicted RBP11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ASIC4Q96FT7 647 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 SENP8Q96LD8 212 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 PGLYRP2Q96PD5 576 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 TMEM209Q96SK2 561 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 ASB7Q9H672 318 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 TMEM206Q9H813 350 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 DPP3Q9NY33 737 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 HCN4Q9Y3Q4 1203 aa11.03□□□□□ -0.64
NCKIPSD-202ENST00000413374 M0QZQ0 153 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 PIRO00625 290 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 CLIC2O15247 247 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 XYLBO75191 536 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 ABLIM3O94929 683 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 LRG1P02750 347 aa11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 HNRNPA1P09651 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
NCKIPSD-202ENST00000413374 GARTP22102 1010 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms