RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GCAP28676 217 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 QARSP47897 775 aaKnown RBP18.7■□□□□ 0.58
SDCBP-202ENST00000413219 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 MICAL1Q8TDZ2 1067 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 OSBPL8Q9BZF1 889 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 TRABDQ9H4I3 376 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 MYPNQ86TC9 1320 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 ABLIM1O14639 778 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 SLC16A4O15374 487 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 PLA2G6O60733 806 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 TOM1O60784 492 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 HNRNPCL1O60812 293 aaKnown RBP18.7■□□□□ 0.58
SDCBP-202ENST00000413219 FDX1P10109 184 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 KRT5P13647 590 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 GCKP35557 465 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 RBM5P52756 815 aaKnown RBP eCLIP18.7■□□□□ 0.58
SDCBP-202ENST00000413219 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 MAP4K3Q8IVH8 894 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 EXD1Q8NHP7 514 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
SDCBP-202ENST00000413219 CCDC127Q96BQ5 260 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 FBXL18Q96ME1 805 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 PAIP2Q9BPZ3 127 aaKnown RBP18.7■□□□□ 0.58
SDCBP-202ENST00000413219 TMX2Q9Y320 296 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 UMODL1Q5DID0 1318 aa18.7■□□□□ 0.58
SDCBP-202ENST00000413219 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 DDX39AO00148 427 aaKnown RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 HGSO14964 777 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 DHX15O43143 795 aaKnown RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 ABL2P42684 1182 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 PEX3P56589 373 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 BPIFB4P59827 614 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 AOC3Q16853 763 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 CCDC142Q17RM4 750 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 STRIP1Q5VSL9 837 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 FAM13CQ8NE31 585 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 ZNF398Q8TD17 642 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SLC7A6OSQ96CW6 309 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SMC6Q96SB8 1091 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 HEMGNQ9BXL5 484 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SLC24A3Q9HC58 644 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 NKX1-2Q9UD57 310 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SERPINA10Q9UK55 444 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 TBX20Q9UMR3 447 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SMCHD1A6NHR9 2005 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 DNALI1O14645 258 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 NDC80O14777 642 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SKAP2O75563 359 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 CYP1A1P04798 512 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 TPBGLP0DKB5 382 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 ITGB5P18084 799 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 CCNHP51946 323 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 ADCY1Q08828 1119 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 P3H1Q32P28 736 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 LIN9Q5TKA1 542 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 CYP4F22Q6NT55 531 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 DRICH1Q6PGQ1 229 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 PAXIP1Q6ZW49 1069 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 APLFQ8IW19 511 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 LRRC8CQ8TDW0 803 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 C10orf82Q8WW14 230 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SAAL1Q96ER3 474 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 KIAA1683Q9H0B3 1180 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 TLE6Q9H808 572 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SSU72Q9NP77 194 aaKnown RBP18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SAYSD1Q9NPB0 183 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 KCNH7Q9NS40 1196 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 ZFATQ9P243 1243 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 HAO1Q9UJM8 370 aa18.69■□□□□ 0.58
SDCBP-202ENST00000413219 SPAG7O75391 227 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 LMNAP02545 664 aaKnown RBP18.68■□□□□ 0.58
SDCBP-202ENST00000413219 T-ENOLP0DO92 83 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 TARSP26639 723 aaKnown RBP18.68■□□□□ 0.58
SDCBP-202ENST00000413219 CETN2P41208 172 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 NSFP46459 744 aaKnown RBP18.68■□□□□ 0.58
SDCBP-202ENST00000413219 SLC45A4Q5BKX6 768 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 SV2AQ7L0J3 742 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 MON1BQ7L1V2 547 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 TBC1D10AQ9BXI6 508 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 SAR1AQ9NR31 198 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 SLC24A2Q9UI40 661 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 NFASCO94856 1347 aa18.68■□□□□ 0.58
SDCBP-202ENST00000413219 NPR1P16066 1061 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 CNGA1P29973 690 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 YWHABP31946 246 aaKnown RBP18.67■□□□□ 0.58
SDCBP-202ENST00000413219 CYP24A1Q07973 514 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 GSTA5Q7RTV2 222 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 FAM160B2Q86V87 743 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.67■□□□□ 0.58
SDCBP-202ENST00000413219 TMEM161BQ8NDZ6 487 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 KCNV2Q8TDN2 545 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 MRPL47Q9HD33 250 aaKnown RBP18.67■□□□□ 0.58
SDCBP-202ENST00000413219 CYLDQ9NQC7 956 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 LNPEPQ9UIQ6 1025 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms