RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CHRNA1P02708 482 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ATICP31939 592 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 MYL6P60660 151 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TFAMQ00059 246 aaKnown RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 AMPD2Q01433 879 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 FMO1Q01740 532 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CDR2Q01850 454 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PTK7Q13308 1070 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ZBTB6Q15916 424 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 SLC47A2Q86VL8 602 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ZNF677Q86XU0 584 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CCDC94Q9BW85 323 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PACSIN1Q9BY11 444 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 BCO2Q9BYV7 579 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 IMPG2Q9BZV3 1241 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 NIF3L1Q9GZT8 377 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ISCUQ9H1K1 167 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 FAM124BQ9H5Z6 455 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 HMX1Q9NP08 348 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ITGA11Q9UKX5 1188 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PTCH2Q9Y6C5 1203 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CAPN6Q9Y6Q1 641 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 M0QZ92 97 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TMEM253P0C7T8 217 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 GZMAP12544 262 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TNFAIP3P21580 790 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ASPAP45381 313 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PDE6CP51160 858 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 ITGA7Q13683 1181 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TUBB2AQ13885 445 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TMEM132DQ14C87 1099 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PTGISQ16647 500 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PALB2Q86YC2 1186 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 RPUSD2Q8IZ73 545 aaKnown RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TRIM58Q8NG06 486 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 FAM212AQ96EL1 285 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 NAPGQ99747 312 aaPredicted RBP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 TUBB2BQ9BVA1 445 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 PCDHGC5Q9Y5F6 944 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 MRFAP1Q9Y605 127 aa5.92□□□□□ -1.46
EPHA4-202ENST00000409854 CTIFO43310 598 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 H2AFZP0C0S5 128 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 BPIFB4P59827 614 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 H2AFVQ71UI9 128 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 SMG8Q8ND04 991 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 U2AF1L4Q8WU68 220 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PCDHB18PQ96TA0 734 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 SNTG2Q9NY99 539 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PIN4Q9Y237 131 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 GINS2Q9Y248 185 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PCDHB2Q9Y5E7 798 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 SQORQ9Y6N5 450 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 A0A1W2PQ45 241 aaPredicted RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 A0A1W2PQY0 241 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 MACROD2A1Z1Q3 448 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 CTAGE9A4FU28 777 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TACC1O75410 805 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 MOCS3O95396 460 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 MMEP08473 750 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 KCNE1P15382 129 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 HADHBP55084 474 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TRPC3Q13507 836 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ZNF699Q32M78 642 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 FAM47CQ5HY64 1035 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PAPD7Q5XG87 772 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ZMAT2Q96NC0 199 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TRAIPQ9BWF2 469 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 SEZ6LQ9BYH1 1024 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 CXCL16Q9H2A7 254 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 NXF3Q9H4D5 531 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ERVK-5Q9HDB9 667 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PAK6Q9NQU5 681 aaPredicted RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TAS2R14Q9NYV8 317 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ANKRD62A6NC57 917 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 RTN2O75298 545 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 RECQL4O94761 1208 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 CYP1A1P04798 512 aaPredicted RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ITGB3P05106 788 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 USP8P40818 1118 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 GALCP54803 685 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 RBBP8NLQ8NC74 664 aaPredicted RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 CALR3Q96L12 384 aaKnown RBP5.91□□□□□ -1.46
EPHA4-202ENST00000409854 NOX5Q96PH1 765 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 ACP6Q9NPH0 428 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 DPP3Q9NY33 737 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 PTPN22Q9Y2R2 807 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 IPPQ9Y573 584 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 TRIM17Q9Y577 477 aa5.91□□□□□ -1.46
EPHA4-202ENST00000409854 RPS6KA5O75582 802 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 UNGP13051 313 aaPredicted RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 KRT5P13647 590 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 YARSP54577 528 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 YWHAEP62258 255 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms