RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PPP1R2P41236 205 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 PNPLA4P41247 253 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 BRCC3P46736 316 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
CHMP3-205ENST00000409810 STIM1Q13586 685 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 MYBPC2Q14324 1141 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 PSMD5Q16401 504 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 RTP2Q5QGT7 225 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 C9orf57Q5W0N0 161 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 LLGL2Q6P1M3 1020 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 ANKS3Q6ZW76 656 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TAS1R1Q7RTX1 841 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 SLC9A9Q8IVB4 645 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 EFCAB13Q8IY85 973 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 ZSWIM2Q8NEG5 633 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 SPATA20Q8TB22 786 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 TMEM174Q8WUU8 243 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 SUSD3Q96L08 255 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 PCDHA5Q9Y5H7 936 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 HCFC2Q9Y5Z7 792 aa11.8□□□□□ -0.52
CHMP3-205ENST00000409810 H3BQ06 376 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-205ENST00000409810 H7C4K7 107 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TEX28O15482 410 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 LINC01565O15544 149 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 GLP2RO95838 553 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TNNC2P02585 160 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 NR3C1P04150 777 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TKTP29401 623 aaKnown RBP11.79□□□□□ -0.52
CHMP3-205ENST00000409810 LTBRP36941 435 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TAF6P49848 677 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 CLCN4P51793 760 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TFF2Q03403 129 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 SMAD4Q13485 552 aaKnown RBP11.79□□□□□ -0.52
CHMP3-205ENST00000409810 NFIL3Q16649 462 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 COBLL1Q53SF7 1204 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 ANKRD54Q6NXT1 300 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 CD300LGQ6UXG3 332 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 USP37Q86T82 979 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 WDR49Q8IV35 697 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 RDH13Q8NBN7 331 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 B3GALT6Q96L58 329 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TSG101Q99816 390 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 PDE11AQ9HCR9 933 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 ITGA11Q9UKX5 1188 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 BARX2Q9UMQ3 279 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-205ENST00000409810 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 FRMD4BQ9Y2L6 1034 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 TSC2P49815 1807 aa11.79□□□□□ -0.52
CHMP3-205ENST00000409810 ANO9A1A5B4 782 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 I3L4J1 428 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 M0QZQ0 153 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 PIRO00625 290 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 ODC1P11926 461 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 TNNI1P19237 187 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 NR2F2P24468 414 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 DLX2Q07687 328 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 KCNC3Q14003 757 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 PSMD6Q15008 389 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 SV2CQ496J9 727 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 ZNF280DQ6N043 979 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 PRSS55Q6UWB4 352 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 SMRP1Q8NCR6 262 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 VN1R2Q8NFZ6 395 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-205ENST00000409810 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 SFXN1Q9H9B4 322 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 INTS13Q9NVM9 706 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 CLEC1BQ9P126 229 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 MTRRQ9UBK8 725 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 MAPK8IP1Q9UQF2 711 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 BACE2Q9Y5Z0 518 aa11.78□□□□□ -0.52
CHMP3-205ENST00000409810 NCOR1O75376 2440 aa11.77□□□□□ -0.52
CHMP3-205ENST00000409810 PSMA7O14818 248 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 MAPK13O15264 365 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 ITGB3P05106 788 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 KRT19P08727 400 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 EPCAMP16422 314 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 TYMPP19971 482 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
CHMP3-205ENST00000409810 AP3M2P53677 418 aa11.77□□□□□ -0.53
CHMP3-205ENST00000409810 LILRA4P59901 499 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms