RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
CHMP3-204ENST00000409727 CITO14578 2027 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 MEIS3P2A8K0S8 358 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 PQBP1O60828 265 aaKnown RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 LCA5LO95447 670 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 CD58P19256 250 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 VAV2P52735 878 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 GNG11P61952 73 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 POU5F1Q01860 360 aaKnown RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 NOP9Q86U38 636 aaKnown RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 CD302Q8IX05 232 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
CHMP3-204ENST00000409727 LPPQ93052 612 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 FAM105AQ9NUU6 356 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 PCDHB4Q9Y5E5 795 aa13.37□□□□□ -0.27
CHMP3-204ENST00000409727 MACROD2A1Z1Q3 448 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.275e-10■■■□□ 17.8
CHMP3-204ENST00000409727 MGEA5O60502 916 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 WEE2P0C1S8 567 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 TNFAIP3P21580 790 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-204ENST00000409727 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 TMEM270Q6UE05 265 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 RPUSD2Q8IZ73 545 aaKnown RBP13.36□□□□□ -0.27
CHMP3-204ENST00000409727 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 AGPAT1Q99943 283 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 PACSIN1Q9BY11 444 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 NIF3L1Q9GZT8 377 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 KIF5CO60282 957 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 CYP11B1P15538 503 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 PDE6CP51160 858 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 KIF5AQ12840 1032 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 ALKBH5Q6P6C2 394 aaKnown RBP13.36□□□□□ -0.27
CHMP3-204ENST00000409727 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 HPDLQ96IR7 371 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 WDR24Q96S15 920 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 ADAM2Q99965 735 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 CNTN3Q9P232 1028 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 NAGPAQ9UK23 515 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 PAXBP1Q9Y5B6 917 aa13.36□□□□□ -0.27
CHMP3-204ENST00000409727 TRIP11Q15643 1979 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 PPEF2O14830 753 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 KRT86O43790 486 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 MMEP08473 750 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ITGA4P13612 1032 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 MLH1P40692 756 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ASPAP45381 313 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 CDK7P50613 346 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 RBP5P82980 135 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ZNF394Q53GI3 561 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ZNF569Q5MCW4 686 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 NT5DC4Q86YG4 428 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 OLIG1Q8TAK6 271 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 ZNF333Q96JL9 665 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
CHMP3-204ENST00000409727 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
CHMP3-204ENST00000409727 CAND2O75155 1236 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 CDH8P55286 799 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
CHMP3-204ENST00000409727 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 RBBP8NLQ8NC74 664 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-204ENST00000409727 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
CHMP3-204ENST00000409727 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
CHMP3-204ENST00000409727 CISHQ9NSE2 258 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
CHMP3-204ENST00000409727 DERAQ9Y315 318 aa13.34□□□□□ -0.27
CHMP3-204ENST00000409727 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.27
CHMP3-204ENST00000409727 FANCGO15287 622 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 CHRNB2P17787 502 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms