RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TBKBP1A7MCY6 615 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 ERVV-1B6SEH8 477 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 RAD54LQ92698 747 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PRKAB1Q9Y478 270 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 BAZ2BQ9UIF8 2168 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 FAM47E-STBD1D6RA91 191 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 MAPK13O15264 365 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PARNO95453 639 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 BRAFP15056 766 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 CHI3L1P36222 383 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 BTN2A1Q7KYR7 527 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 FGD2Q7Z6J4 655 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 RDM1Q8NG50 284 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 ARHGEF38Q9NXL2 777 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PCDHA10Q9Y5I2 948 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 METP08581 1390 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 ZNF512BQ96KM6 892 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 TRIM33Q9UPN9 1127 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PLAAQ9Y263 795 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 RASSF9O75901 435 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 EPHB4P54760 987 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 NNTQ13423 1086 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 SNX17Q15036 470 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PTPRHQ9HD43 1115 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 CRLS1Q9UJA2 301 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PCDHB12Q9Y5F1 795 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 NFICP08651 508 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 FGFR4P22455 802 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 TSC22D1Q15714 1073 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 KNOP1Q1ED39 458 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 OPTNQ96CV9 577 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PLEKHA8Q96JA3 519 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 SLITRK1Q96PX8 696 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 GBA2Q9HCG7 927 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 MED4Q9NPJ6 270 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 TIMM13Q9Y5L4 95 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 ITGB3P05106 788 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 IYDQ6PHW0 289 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 KRT77Q7Z794 578 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 FAM162AQ96A26 154 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 EIF2AQ9BY44 585 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 PARVAQ9NVD7 372 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 SMPD4Q9NXE4 827 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 GPC1P35052 558 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 CLCN1P35523 988 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 CUL3Q13618 768 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 SLC39A14Q15043 492 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 PGS1Q32NB8 556 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ENAHQ8N8S7 591 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 RABGGTAQ92696 567 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 COPS7BQ9H9Q2 264 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 EML4Q9HC35 981 aaKnown RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 TXLNGQ9NUQ3 528 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 NDE1Q9NXR1 346 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 KRT37O76014 449 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 LARGE1O95461 756 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 GSNP06396 782 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 TBXAS1P24557 533 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 MAP3K7CLP57077 242 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 NCAPHQ15003 741 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 STX19Q8N4C7 294 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 NBPF15Q8N660 670 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ICA1LQ8NDH6 482 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 RIN3Q8TB24 985 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ASZ1Q8WWH4 475 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 RNF208Q9H0X6 261 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 RHBGQ9H310 441 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 FGFR2P21802 821 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 RPS7P62081 194 aaKnown RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 POLD3Q15054 466 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 EPC2Q52LR7 807 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 MAGEF1Q9HAY2 307 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 KIAA1586Q9HCI6 787 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 GIMAP4Q9NUV9 329 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 URODP06132 367 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 MTBPQ96DY7 904 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 MS4A14Q96JA4 679 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 BBS2Q9BXC9 721 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 UNKQ9C0B0 810 aaKnown RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 ZNF70Q9UC06 446 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 PLXNC1O60486 1568 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 DDNO94850 711 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 ALOX15P16050 662 aaPredicted RBP8.82□□□□□ -1
SCN9A-203ENST00000409672 RAP1GAPP47736 663 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 SPARCL1Q14515 664 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 PALB2Q86YC2 1186 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 CYP4X1Q8N118 509 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 CYGBQ8WWM9 190 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.82□□□□□ -1
SCN9A-203ENST00000409672 ELMO3Q96BJ8 720 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 PYCARDQ9ULZ3 195 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ADGRL3Q9HAR2 1447 aa8.82□□□□□ -1
SCN9A-203ENST00000409672 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms