RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 KLHL5Q96PQ7 755 aa21.47■■□□□ 1.03
PDLIM2-207ENST00000409417 I3L4J1 428 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 SYN3O14994 580 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 TEX28O15482 410 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 LINC01565O15544 149 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 KCNA5P22460 613 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 PAX3P23760 479 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 MCM4P33991 863 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 AARSP49588 968 aaKnown RBP eCLIP21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 PSMD6Q15008 389 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 TMEM184AQ6ZMB5 413 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 PPFIBP1Q86W92 1011 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 ADSSL1Q8N142 457 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 VN1R2Q8NFZ6 395 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 ATXN2LQ8WWM7 1075 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 INTS13Q9NVM9 706 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 KIAA1468Q9P260 1216 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 FNIP2Q9P278 1114 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 ANK1P16157 1881 aa21.46■■□□□ 1.03
PDLIM2-207ENST00000409417 PPEF2O14830 753 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 GLP2RO95838 553 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 ADH1AP07327 375 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 RPL13P26373 211 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 KLRC2P26717 231 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 TKTP29401 623 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 LILRA4P59901 499 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 TFF2Q03403 129 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 MORC3Q14149 939 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 AAK1Q2M2I8 961 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 EDRF1Q3B7T1 1238 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 ISM2Q6H9L7 571 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 CENPPQ6IPU0 288 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 PRSS55Q6UWB4 352 aaPredicted RBP21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 WDR49Q8IV35 697 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 LNX1Q8TBB1 728 aaPredicted RBP21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 CCDC127Q96BQ5 260 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 FNBP1Q96RU3 617 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 CLSTN2Q9H4D0 955 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 FRMD4BQ9Y2L6 1034 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 HCFC2Q9Y5Z7 792 aa21.45■■□□□ 1.03
PDLIM2-207ENST00000409417 M0QZQ0 153 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 TMEM191BP0C7N4 346 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 SRGAP2BP0DMP2 458 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 DLATP10515 647 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 BMP6P22004 513 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 NR2F2P24468 414 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 NDUFV1P49821 464 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 RBM10P98175 930 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 DLX2Q07687 328 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 STIM1Q13586 685 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 DUOXA2Q1HG44 320 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 C1orf127Q8N9H9 656 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 MTMR12Q9C0I1 747 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 ITGA11Q9UKX5 1188 aa21.45■■□□□ 1.02
PDLIM2-207ENST00000409417 BIN1O00499 593 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 TBX10O75333 385 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 PPP1R2P41236 205 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 CASP4P49662 377 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 MRPS5P82675 430 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 ADAM9Q13443 819 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 PSMD5Q16401 504 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 LMBRD2Q68DH5 695 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 ANKS3Q6ZW76 656 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 TRIML1Q8N9V2 468 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 APPL2Q8NEU8 664 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 OR5B17Q8NGF7 314 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 CXorf38Q8TB03 319 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 SLC22A17Q8WUG5 538 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 DHTKD1Q96HY7 919 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 ANKRD36BP1Q96IX9 119 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 GZF1Q9H116 711 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 CLEC1BQ9P126 229 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 PTPRJQ12913 1337 aa21.44■■□□□ 1.02
PDLIM2-207ENST00000409417 H3BQ06 376 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 PSMA7O14818 248 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 MAPK13O15264 365 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 C1RP00736 705 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 TNNC2P02585 160 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 TNNI1P19237 187 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CLCN4P51793 760 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 LEXMQ3ZCV2 418 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CEP135Q66GS9 1140 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 LLGL2Q6P1M3 1020 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CSGALNACT2Q8N6G5 542 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CASP10Q92851 521 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 FAM84AQ96KN4 292 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 POP1Q99575 1024 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CGRRF1Q99675 332 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 CLSTN3Q9BQT9 956 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 MTRRQ9UBK8 725 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 BARX2Q9UMQ3 279 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 PCDHB8Q9UN66 801 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 BACE2Q9Y5Z0 518 aa21.43■■□□□ 1.02
PDLIM2-207ENST00000409417 SPTLC1O15269 473 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 AKAP3O75969 853 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 ITGB3P05106 788 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 RPL17P18621 184 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms