RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 ULK4Q96C45 1275 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 MED15Q96RN5 788 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
PCDH20-201ENST00000409204 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
PCDH20-201ENST00000409204 MEIS2O14770 477 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 CYBBP04839 570 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 LRRC71Q8N4P6 559 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
PCDH20-201ENST00000409204 APOL1O14791 398 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 P4HA2O15460 535 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PMS2P54278 862 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 TPI1P60174 286 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 COPS2P61201 443 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 OPTNQ96CV9 577 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 LSM7Q9UK45 103 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 NAA30Q147X3 362 aaPredicted RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 E2F4Q16254 413 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 EFCAB12Q6NXP0 572 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 SAMD3Q8N6K7 520 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 SNF8Q96H20 258 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 TMEM247A6NEH6 219 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PI4K2BG5E9Z4 385 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 GTF2A2P52657 109 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 NT5DC1Q5TFE4 455 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 CCDC124Q96CT7 223 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 ACTR5Q9H9F9 607 aaPredicted RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 OLA1Q9NTK5 396 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 SYNPO2Q9UMS6 1093 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PCDHB2Q9Y5E7 798 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 E5RI56 91 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 CFLARO15519 480 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 DCTN3O75935 186 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 TCF7P36402 384 aaPredicted RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 PGM5Q15124 567 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 RANBP17Q9H2T7 1088 aaKnown RBP12.78□□□□□ -0.36
PCDH20-201ENST00000409204 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 FHOD1Q9Y613 1164 aa12.78□□□□□ -0.36
PCDH20-201ENST00000409204 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 EML1O00423 815 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 TBC1D12O60347 775 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 HLA-DRAP01903 254 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 MMEP08473 750 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 CPT1AP50416 773 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 HERVK_113P62684 666 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 OTOP1Q7RTM1 612 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 ATL2Q8NHH9 583 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 TRIM54Q9BYV2 358 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 TMEM8AQ9HCN3 771 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 AGPAT3Q9NRZ7 376 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 AP3B1O00203 1094 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 GALCP54803 685 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 SV2CQ496J9 727 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 FSCBQ5H9T9 825 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 EPM2AIP1Q7L775 607 aaPredicted RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 RCOR2Q8IZ40 523 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 EFHBQ8N7U6 833 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 DYRK4Q9NR20 520 aa12.77□□□□□ -0.36
PCDH20-201ENST00000409204 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 PACSIN2Q9UNF0 486 aaPredicted RBP12.77□□□□□ -0.36
PCDH20-201ENST00000409204 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 LUC7L3O95232 432 aaKnown RBP12.77□□□□□ -0.37
PCDH20-201ENST00000409204 IFNA8P32881 189 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 DGKZQ13574 1117 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 CDKAL1Q5VV42 579 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 ACAD11Q709F0 780 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 ZC3H18Q86VM9 953 aaKnown RBP12.77□□□□□ -0.37
PCDH20-201ENST00000409204 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 RMDN1Q96DB5 314 aa12.77□□□□□ -0.37
PCDH20-201ENST00000409204 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms