RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DNAJC24Q6P3W2 148 aa8.82□□□□□ -1
SNX13-201ENST00000409076 SESTD1Q86VW0 696 aa8.82□□□□□ -1
SNX13-201ENST00000409076 LRRC6Q86X45 466 aa8.82□□□□□ -1
SNX13-201ENST00000409076 DAW1Q8N136 415 aa8.82□□□□□ -1
SNX13-201ENST00000409076 FAM161BQ96MY7 647 aa8.82□□□□□ -1
SNX13-201ENST00000409076 MSTO1Q9BUK6 570 aa8.82□□□□□ -1
SNX13-201ENST00000409076 PPARGC1AQ9UBK2 798 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 PARP2Q9UGN5 583 aa8.82□□□□□ -1
SNX13-201ENST00000409076 GOLGA4Q13439 2230 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 ZMYM2Q9UBW7 1377 aa8.82□□□□□ -1
SNX13-201ENST00000409076 FAM187AA6NFU0 413 aa8.82□□□□□ -1
SNX13-201ENST00000409076 hCG_1984214I3L0E3 225 aa8.82□□□□□ -1
SNX13-201ENST00000409076 INO80B-WBP1J3KQ70 363 aa8.82□□□□□ -1
SNX13-201ENST00000409076 TOM1L1O75674 476 aa8.82□□□□□ -1
SNX13-201ENST00000409076 RASSF9O75901 435 aa8.82□□□□□ -1
SNX13-201ENST00000409076 PECAM1P16284 738 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 ATP2A2P16615 1042 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 ALDH3A1P30838 453 aa8.82□□□□□ -1
SNX13-201ENST00000409076 FOXN2P32314 431 aa8.82□□□□□ -1
SNX13-201ENST00000409076 GTF2H1P32780 548 aa8.82□□□□□ -1
SNX13-201ENST00000409076 NPTX2P47972 431 aa8.82□□□□□ -1
SNX13-201ENST00000409076 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 PSEN1P49768 467 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ALDH18A1P54886 795 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 CAPRIN2Q6IMN6 1127 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 MFSD7Q6UXD7 560 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ARHGEF18Q6ZSZ5 1173 aa8.82□□□□□ -1
SNX13-201ENST00000409076 ZNF713Q8N859 430 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 C7orf31Q8N865 590 aa8.82□□□□□ -1
SNX13-201ENST00000409076 USP6NLQ92738 828 aa8.82□□□□□ -1
SNX13-201ENST00000409076 MKL1Q969V6 931 aa8.82□□□□□ -1
SNX13-201ENST00000409076 FAM111AQ96PZ2 611 aa8.82□□□□□ -1
SNX13-201ENST00000409076 MECRQ9BV79 373 aa8.82□□□□□ -1
SNX13-201ENST00000409076 INO80BQ9C086 356 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 KIAA1683Q9H0B3 1180 aa8.82□□□□□ -1
SNX13-201ENST00000409076 POLR3FQ9H1D9 316 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 NGRNQ9NPE2 291 aaKnown RBP8.82□□□□□ -1
SNX13-201ENST00000409076 NKX1-2Q9UD57 310 aaPredicted RBP8.82□□□□□ -1
SNX13-201ENST00000409076 TOGARAM1Q9Y4F4 1720 aa8.82□□□□□ -1
SNX13-201ENST00000409076 GMPRP36959 345 aa8.81□□□□□ -1
SNX13-201ENST00000409076 PHKA2P46019 1235 aa8.81□□□□□ -1
SNX13-201ENST00000409076 RARRES1P49788 294 aa8.81□□□□□ -1
SNX13-201ENST00000409076 CFAP157Q5JU67 520 aa8.81□□□□□ -1
SNX13-201ENST00000409076 NPNTQ6UXI9 565 aa8.81□□□□□ -1
SNX13-201ENST00000409076 ZNF662Q6ZS27 426 aa8.81□□□□□ -1
SNX13-201ENST00000409076 RSPH3Q86UC2 560 aa8.81□□□□□ -1
SNX13-201ENST00000409076 TRIM50Q86XT4 487 aa8.81□□□□□ -1
SNX13-201ENST00000409076 DCLK2Q8N568 766 aa8.81□□□□□ -1
SNX13-201ENST00000409076 FAM71DQ8N9W8 422 aa8.81□□□□□ -1
SNX13-201ENST00000409076 UBA3Q8TBC4 463 aa8.81□□□□□ -1
SNX13-201ENST00000409076 BSNDQ8WZ55 320 aa8.81□□□□□ -1
SNX13-201ENST00000409076 WNK4Q96J92 1243 aa8.81□□□□□ -1
SNX13-201ENST00000409076 ZDHHC18Q9NUE0 388 aa8.81□□□□□ -1
SNX13-201ENST00000409076 DLGAP2Q9P1A6 1054 aa8.81□□□□□ -1
SNX13-201ENST00000409076 ARL2BPQ9Y2Y0 163 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MYO18AQ92614 2054 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 LOC100653049A0A140TA62 436 aa8.81□□□□□ -1
SNX13-201ENST00000409076 ATP2A1O14983 1001 aa8.81□□□□□ -1
SNX13-201ENST00000409076 KRT34O76011 436 aa8.81□□□□□ -1
SNX13-201ENST00000409076 STK10O94804 968 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 CPP00450 1065 aa8.81□□□□□ -1
SNX13-201ENST00000409076 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 PSMA2P25787 234 aa8.81□□□□□ -1
SNX13-201ENST00000409076 JAM2P57087 298 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MKRN3Q13064 507 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 AMHR2Q16671 573 aa8.81□□□□□ -1
SNX13-201ENST00000409076 FYB2Q5VWT5 728 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MIS18BP1Q6P0N0 1132 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MREGQ8N565 214 aa8.81□□□□□ -1
SNX13-201ENST00000409076 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.81□□□□□ -1
SNX13-201ENST00000409076 ATXN2LQ8WWM7 1075 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 CLPTM1LQ96KA5 538 aa8.81□□□□□ -1
SNX13-201ENST00000409076 CRAMP1Q96RY5 1269 aa8.81□□□□□ -1
SNX13-201ENST00000409076 SMYD2Q9NRG4 433 aa8.81□□□□□ -1
SNX13-201ENST00000409076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.81□□□□□ -1
SNX13-201ENST00000409076 IVNS1ABPQ9Y6Y0 642 aa8.81□□□□□ -1
SNX13-201ENST00000409076 CCNHP51946 323 aaPredicted RBP8.81□□□□□ -1
SNX13-201ENST00000409076 PEX6Q13608 980 aa8.81□□□□□ -1
SNX13-201ENST00000409076 POU5F2Q8N7G0 328 aa8.81□□□□□ -1
SNX13-201ENST00000409076 TRAPPC12Q8WVT3 735 aa8.81□□□□□ -1
SNX13-201ENST00000409076 ATG4CQ96DT6 458 aa8.81□□□□□ -1
SNX13-201ENST00000409076 PRR11Q96HE9 360 aaPredicted RBP8.81□□□□□ -1
SNX13-201ENST00000409076 RUNDC3BQ96NL0 473 aa8.81□□□□□ -1
SNX13-201ENST00000409076 HSD17B14Q9BPX1 270 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MAK16Q9BXY0 300 aaKnown RBP8.81□□□□□ -1
SNX13-201ENST00000409076 PDGFDQ9GZP0 370 aaPredicted RBP8.81□□□□□ -1
SNX13-201ENST00000409076 AK5Q9Y6K8 562 aa8.81□□□□□ -1
SNX13-201ENST00000409076 MIF4GDA9UHW6 222 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 SLC16A3O15427 465 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 TOP3BO95985 862 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 RARGP13631 454 aa8.8□□□□□ -1
SNX13-201ENST00000409076 GBP1P32455 592 aa8.8□□□□□ -1
SNX13-201ENST00000409076 PTGIRP43119 386 aa8.8□□□□□ -1
SNX13-201ENST00000409076 SLC1A5Q15758 541 aa8.8□□□□□ -1
SNX13-201ENST00000409076 PREPLQ4J6C6 727 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
SNX13-201ENST00000409076 SNRNP48Q6IEG0 339 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 RFWD3Q6PCD5 774 aa8.8□□□□□ -1
SNX13-201ENST00000409076 C3orf62Q6ZUJ4 267 aa8.8□□□□□ -1
SNX13-201ENST00000409076 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms