RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SCNN1DP51172 638 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SH3RF3Q8TEJ3 882 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 FAM111AQ96PZ2 611 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 PAGR1Q9BTK6 254 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 BEGAINQ9BUH8 593 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 XPO7Q9UIA9 1087 aaKnown RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 COMMD3-BMI1R4GMX3 469 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 UBE2Q2LH0YL09 131 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 BMP6P22004 513 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 TTC33Q6PID6 262 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 ZNF571Q7Z3V5 609 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 ADCK1Q86TW2 530 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 DCAF4Q8WV16 495 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 REEP2Q9BRK0 252 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 MYLK2Q9H1R3 596 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 ZNF394Q53GI3 561 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 KAT2BQ92831 832 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SENP7Q9BQF6 1050 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 MMADHCQ9H3L0 296 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 PCMTD2Q9NV79 361 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 ADGRA3Q8IWK6 1321 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 PMS1P54277 932 aaKnown RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 MTFR1Q15390 333 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 HEATR6Q6AI08 1181 aaKnown RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 LRRC8BQ6P9F7 803 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 MTHFD1LQ6UB35 978 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SH3RF1Q7Z6J0 888 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 NDUFAF2Q8N183 169 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 MCPH1Q8NEM0 835 aa18.56■□□□□ 0.56
SMPD4-202ENST00000409031 TMA16Q96EY4 203 aaKnown RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-202ENST00000409031 SKIV2L2P42285 1042 aaKnown RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 PTDSS1P48651 473 aaKnown RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 TFDP1Q14186 410 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 GSTA3Q16772 222 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 SUSD4Q5VX71 490 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 PPIL6Q8IXY8 311 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 WDR60Q8WVS4 1066 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 ARHGEF26Q96DR7 871 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 FRMD8Q9BZ67 464 aaPredicted RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 TM9SF1O15321 606 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 SLC16A4O15374 487 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 IGBP1P78318 339 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 SLC12A1Q13621 1099 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 TERB1Q8NA31 727 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 CKAP2Q8WWK9 683 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 MED10Q9BTT4 135 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 WLSQ5T9L3 541 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 RNF43Q68DV7 783 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 DAGLBQ8NCG7 672 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 TMEM120AQ9BXJ8 343 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 ADNPQ9H2P0 1102 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 IQCA1LA6NCM1 817 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 CYP27B1O15528 508 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 RALAP11233 206 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 CRKLP46109 303 aaKnown RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 HLFQ16534 295 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 IYDQ6PHW0 289 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 ATP8B4Q8TF62 1192 aa18.55■□□□□ 0.56
SMPD4-202ENST00000409031 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
SMPD4-202ENST00000409031 M0R3G1 203 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 HSPA1AP0DMV8 641 aaKnown RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 HSPA1BP0DMV9 641 aaKnown RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 ZNF667Q5HYK9 610 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 SCARA5Q6ZMJ2 495 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 AGR3Q8TD06 166 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 HEXIM2Q96MH2 286 aaKnown RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 PRPF18Q99633 342 aaKnown RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 FAM213AQ9BRX8 229 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 C20orf96Q9NUD7 363 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 FAM53CQ9NYF3 392 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 PAMP19021 973 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 CNGA2Q16280 664 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 ZNF513Q8N8E2 541 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 TUFT1Q9NNX1 390 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 KLHL8Q9P2G9 620 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 ANGPTL3Q9Y5C1 460 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 USP17L10C9JJH3 530 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 CCNHP51946 323 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 GSCP56915 257 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 SBK1Q52WX2 424 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 SLC45A4Q5BKX6 768 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 ZBTB18Q99592 522 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 EIF3DO15371 548 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMPD4-202ENST00000409031 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 FAM160B1Q5W0V3 765 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 SIX6OS1Q8N1H7 587 aa18.54■□□□□ 0.56
SMPD4-202ENST00000409031 ADGRB3O60242 1522 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 TRIM49D1C9J1S8 452 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 WFS1O76024 890 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 CCDC15Q0P6D6 951 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 HAUS6Q7Z4H7 955 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 KCTD17Q8N5Z5 321 aa18.53■□□□□ 0.56
SMPD4-202ENST00000409031 RAB6BQ9NRW1 208 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms