RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 LONP1P36776 959 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 MTHFRP42898 656 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 BRCC3P46736 316 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 CD151P48509 253 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 SPAG1Q07617 926 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 UPP1Q16831 310 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TXLNBQ8N3L3 684 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 ASIC4Q96FT7 647 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 FIZ1Q96SL8 496 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TTPALQ9BTX7 342 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TIPINQ9BVW5 301 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 C17orf75Q9HAS0 396 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TUBGCP4Q9UGJ1 667 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 DENND4AQ7Z401 1863 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 CCDC195A0A1B0GUA6 201 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TISP43B9A030 160 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 B3GAT3O94766 335 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 MCF2P10911 925 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TKTP29401 623 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 NMT1P30419 496 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TNFSF9P41273 254 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 ZNF445P59923 1031 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 ZSCAN26Q16670 478 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 SLC10A6Q3KNW5 377 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 SLC39A4Q6P5W5 647 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 RASSF8Q8NHQ8 419 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 CALML4Q96GE6 196 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 GBP4Q96PP9 640 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 LIMD1Q9UGP4 676 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 HCN4Q9Y3Q4 1203 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 NR2E1Q9Y466 385 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 TRIP11Q15643 1979 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 A0A087X0B3 334 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 K7ENM7 598 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 FAM189A1O60320 539 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 TOM1L1O75674 476 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 CXCL8P10145 99 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 PDCP20941 246 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 SCP2P22307 547 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 ZNF131P52739 623 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 MCL1Q07820 350 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 STRN3Q13033 797 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 PSMD5Q16401 504 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 IER5LQ5T953 404 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 FOXD4L5Q5VV16 416 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 DNAJC14Q6Y2X3 702 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 HAUS6Q7Z4H7 955 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 MYCT1Q8N699 235 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 TDRD5Q8NAT2 981 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 FOXD4L4Q8WXT5 416 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 INTS4Q96HW7 963 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 ACAP3Q96P50 834 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 ZHX3Q9H4I2 956 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 KCND2Q9NZV8 630 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 FNIP2Q9P278 1114 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.73
NIF3L1-202ENST00000409020 PODXLO00592 558 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 STX6O43752 255 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 BMP15O95972 392 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 KCNE1P15382 129 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 FGFR3P22607 806 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 SMTNP53814 917 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 YARSP54577 528 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 NTHL1P78549 312 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 CCDC149Q6ZUS6 474 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 KCTD17Q8N5Z5 321 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 ANKRD20A12PQ8NF67 263 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 RSAD2Q8WXG1 361 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 CCDC97Q96F63 343 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 DDX27Q96GQ7 796 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 MYADMQ96S97 322 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 CCSER1Q9C0I3 900 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 FBXW11Q9UKB1 542 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 ODF2LQ9ULJ1 636 aa10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 SRPRBQ9Y5M8 271 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-202ENST00000409020 MYMKA6NI61 221 aa10.5□□□□□ -0.73
NIF3L1-202ENST00000409020 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
NIF3L1-202ENST00000409020 CLDN3O15551 220 aa10.5□□□□□ -0.73
NIF3L1-202ENST00000409020 FAM13AO94988 1023 aa10.5□□□□□ -0.73
NIF3L1-202ENST00000409020 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms