RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 UBR7Q8N806 425 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 ALG3Q92685 438 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 ZSWIM1Q9BR11 485 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 DYNC1LI2O43237 492 aaPredicted RBP26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 SPOPO43791 374 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 STAG3L1P0CL83 205 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 OAS2P29728 719 aaKnown RBP26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 CENPCQ03188 943 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 TAF1CQ15572 869 aaPredicted RBP26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 RASAL3Q86YV0 1011 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 CPB2Q96IY4 423 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 BTBD6Q96KE9 485 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 GDAP1L1Q96MZ0 367 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 PLEKHA4Q9H4M7 779 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 PDZD7Q9H5P4 517 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 ZNF236Q9UL36 1845 aa26.35■■□□□ 1.81
DNMT3A-206ENST00000406659 RRN3P2A6NIE6 340 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 IGF2BP3O00425 579 aaKnown RBP eCLIP26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 ITGBL1O95965 494 aaPredicted RBP26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 ZNF211Q13398 564 aaPredicted RBP26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 GLIPR1L2Q4G1C9 344 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 PRAMEF19Q5SWL8 479 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 MARCH8Q5T0T0 291 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 LIN9Q5TKA1 542 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 PPP1R2P3Q6NXS1 205 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 TMEM192Q8IY95 271 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 NMRK2Q9NPI5 230 aa26.34■■□□□ 1.81
DNMT3A-206ENST00000406659 SART1O43290 800 aaKnown RBP26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 ADCY6O43306 1168 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 ITGA4P13612 1032 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 ZNF132P52740 706 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 GABPB1Q06547 395 aaPredicted RBP26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 PAK2Q13177 524 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 KYAT1Q16773 422 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 SND1Q7KZF4 910 aaKnown RBP eCLIP26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 PASD1Q8IV76 773 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 IFT81Q8WYA0 676 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 KRT35Q92764 455 aa26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 ZCCHC17Q9NP64 241 aaKnown RBP26.33■■□□□ 1.81
DNMT3A-206ENST00000406659 LACTBL1A8MY62 500 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 CD58P19256 250 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 EMBQ6PCB8 327 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 KIAA0319LQ8IZA0 1049 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 CCDC26Q8TAB7 109 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 DDX47Q9H0S4 455 aaKnown RBP26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 SLITRK6Q9H5Y7 841 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 CISHQ9NSE2 258 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 HPCAL4Q9UM19 191 aa26.33■■□□□ 1.8
DNMT3A-206ENST00000406659 POLR3GO15318 223 aaPredicted RBP26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 ERLIN2O94905 339 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 CFHP08603 1231 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 ARF4P18085 180 aaPredicted RBP26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 CTNNA2P26232 953 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 YWHAEP62258 255 aaKnown RBP26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 NOMO3P69849 1222 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 POU5F1Q01860 360 aaKnown RBP26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 MON1BQ7L1V2 547 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 ZNF410Q86VK4 478 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 CD101Q93033 1021 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 SETD4Q9NVD3 440 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 ANAPC7Q9UJX3 599 aa26.32■■□□□ 1.8
DNMT3A-206ENST00000406659 KAT6AQ92794 2004 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 GOLGA6L10A0A0M3HER8 536 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 CCDC66A2RUB6 948 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 KRT19P08727 400 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 RRM1P23921 792 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 SSTR3P32745 418 aaPredicted RBP26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 CARSP49589 748 aaKnown RBP26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 PEX5P50542 639 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 IRF5Q13568 498 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 CHADLQ6NUI6 762 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 ZNF606Q8WXB4 792 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 CASKIN2Q8WXE0 1202 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 XYLT2Q9H1B5 865 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 ADAM22Q9P0K1 906 aa26.31■■□□□ 1.8
DNMT3A-206ENST00000406659 ZSCAN5CA6NGD5 496 aaPredicted RBP26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 H3BQF6 201 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 MARCKSL1P49006 195 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 PPP2R5EQ16537 467 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 SEL1L2Q5TEA6 688 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 SCARA5Q6ZMJ2 495 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 MAATS1Q7Z4T9 603 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 CCDC102AQ96A19 550 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 VCPIP1Q96JH7 1222 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 PCDHA3Q9Y5H8 950 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 ANK1P16157 1881 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 ESYT3A0FGR9 886 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 A6NJR5 290 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 NFICP08651 508 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 WEE2P0C1S8 567 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 CTNNA1P35221 906 aaKnown RBP26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 HSP90B2PQ58FF3 399 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 SMYD5Q6GMV2 418 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 JADE1Q6IE81 842 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 PHLDB2Q86SQ0 1253 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 PHF13Q86YI8 300 aaPredicted RBP26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 C11orf70Q9BRQ4 267 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 ASB7Q9H672 318 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 NFU1Q9UMS0 254 aa26.3■■□□□ 1.8
DNMT3A-206ENST00000406659 TSPAN1O60635 241 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms