RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PIRO00625 290 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 NCK2O43639 380 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 GLP2RO95838 553 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 CNPP09543 421 aaKnown RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 TKTP29401 623 aaKnown RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 MCM4P33991 863 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 TFF2Q03403 129 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 DLX2Q07687 328 aaPredicted RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 MORC3Q14149 939 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 COL19A1Q14993 1142 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 SURF1Q15526 300 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 CEP135Q66GS9 1140 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 SCARA3Q6AZY7 606 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 LLGL2Q6P1M3 1020 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 PRSS55Q6UWB4 352 aaPredicted RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 ADSSL1Q8N142 457 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 VN1R2Q8NFZ6 395 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 CACTINQ8WUQ7 758 aaKnown RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 TMEM174Q8WUU8 243 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 CCDC127Q96BQ5 260 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 MFSD14AQ96MC6 490 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 POP1Q99575 1024 aaKnown RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 EMILIN2Q9BXX0 1053 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 CLSTN2Q9H4D0 955 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 UBE2ZQ9H832 354 aaPredicted RBP15.77■□□□□ 0.12
CDPF1-203ENST00000404583 COG5Q9UP83 839 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 PTPRJQ12913 1337 aa15.77■□□□□ 0.12
CDPF1-203ENST00000404583 DLATP10515 647 aaKnown RBP15.77■□□□□ 0.11
CDPF1-203ENST00000404583 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.11
CDPF1-203ENST00000404583 RPL17P18621 184 aaKnown RBP15.77■□□□□ 0.11
CDPF1-203ENST00000404583 FGFR3P22607 806 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 NR2F2P24468 414 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 KLRC2P26717 231 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 LTBRP36941 435 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 KCNC3Q14003 757 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 MYBPC2Q14324 1141 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 PSMD6Q15008 389 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 NFIL3Q16649 462 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 ZCWPW2Q504Y3 356 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 CENPPQ6IPU0 288 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 OR5B17Q8NGF7 314 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.11
CDPF1-203ENST00000404583 SUSD3Q96L08 255 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 FNBP1Q96RU3 617 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 MTMR12Q9C0I1 747 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 RXFP1Q9HBX9 757 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 INTS13Q9NVM9 706 aa15.77■□□□□ 0.11
CDPF1-203ENST00000404583 PLXNA3P51805 1871 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 TEX28O15482 410 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 TBX10O75333 385 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 ITGB3P05106 788 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 TNNI1P19237 187 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 KCNA5P22460 613 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 NDUFV1P49821 464 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 PMS1P54277 932 aaKnown RBP15.76■□□□□ 0.11
CDPF1-203ENST00000404583 LILRA4P59901 499 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 ADAM9Q13443 819 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 STIM1Q13586 685 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 ANKRD40Q6AI12 368 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 CSGALNACT2Q8N6G5 542 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 PLEKHO2Q8TD55 490 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 ANKRD36BP1Q96IX9 119 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 ASB2Q96Q27 587 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 GZF1Q9H116 711 aaPredicted RBP15.76■□□□□ 0.11
CDPF1-203ENST00000404583 NUP62CLQ9H1M0 184 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 AGAP1Q9UPQ3 857 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 FRMD4BQ9Y2L6 1034 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 HCFC2Q9Y5Z7 792 aa15.76■□□□□ 0.11
CDPF1-203ENST00000404583 TRIM49BA6NDI0 452 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 PPP1R3GB7ZBB8 358 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 H3BQ06 376 aaPredicted RBP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 SPTLC1O15269 473 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 RPL13P26373 211 aaKnown RBP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 POLR2BP30876 1174 aaKnown RBP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 AARSP49588 968 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 PSMD5Q16401 504 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 DUOXA2Q1HG44 320 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 DSTYKQ6XUX3 929 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 GPR65Q8IYL9 337 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 CXorf38Q8TB03 319 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 SLC22A17Q8WUG5 538 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 ZNF516Q92618 1163 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 NECAB3Q96P71 396 aaPredicted RBP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 CGRRF1Q99675 332 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 CLSTN3Q9BQT9 956 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDPF1-203ENST00000404583 CLEC1BQ9P126 229 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 FNIP2Q9P278 1114 aa15.75■□□□□ 0.11
CDPF1-203ENST00000404583 SIX4Q9UIU6 781 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms