RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SLF2Q8IX21 1173 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 ATL2Q8NHH9 583 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 SCG3Q8WXD2 468 aaKnown RBP10.15□□□□□ -0.79
SMC1B-202ENST00000404354 MCUR1Q96AQ8 359 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 DNPEPQ9ULA0 475 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.79
SMC1B-202ENST00000404354 ATP9AO75110 1047 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ASMTLO95671 621 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ETS2P15036 469 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SREBF1P36956 1147 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ARSEP51690 589 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 PDIA2Q13087 525 aaKnown RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SIAH1Q8IUQ4 282 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 CLPTM1LQ96KA5 538 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 FSCN2O14926 492 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 GYG2O15488 501 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 KITP10721 976 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SERPINB3P29508 390 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 CYP1B1Q16678 543 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 FAM102BQ5T8I3 360 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 PLA2G4FQ68DD2 849 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 TRABD2AQ86V40 505 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 XXYLT1Q8NBI6 393 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 NRG4Q8WWG1 115 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 TTC17Q96AE7 1141 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 NAP1L4Q99733 375 aaKnown RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 CADM1Q9BY67 442 aaKnown RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 LRMDAQ9H2I8 198 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 DMAC2Q9NW81 257 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 IRAK4Q9NWZ3 460 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SLC17A7Q9P2U7 560 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 RPS6KA4O75676 772 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ATP6V1C1P21283 382 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 SP100P23497 879 aaPredicted RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 CETN2P41208 172 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 RASSF2P50749 326 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ACSBG2Q5FVE4 666 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 STXBP4Q6ZWJ1 553 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 MAML1Q92585 1016 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 ZNF75CPQ92670 426 aaPredicted RBP10.14□□□□□ -0.79
SMC1B-202ENST00000404354 TTC1Q99614 292 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 TMEM121Q9BTD3 319 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
SMC1B-202ENST00000404354 EIF3DO15371 548 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 SERPINB4P48594 390 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 AP3B2Q13367 1082 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 THOC5Q13769 683 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 Q4G0T1 1027 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 ZNF394Q53GI3 561 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 HAUS6Q7Z4H7 955 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 AGGF1Q8N302 714 aaeCLIP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 PDCD7Q8N8D1 485 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 ASAP3Q8TDY4 903 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 PTPRN2Q92932 1015 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 NACC1Q96RE7 527 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 POLR3CQ9BUI4 534 aaPredicted RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 OSBPL8Q9BZF1 889 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 ZC3H12CQ9C0D7 883 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 ZNF395Q9H8N7 513 aaPredicted RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 FBXO28Q9NVF7 368 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 GTF3C4Q9UKN8 822 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 LRRC42Q9Y546 428 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 IGLV3-22A0A075B6J6 115 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 SMAPO00193 183 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 EDF1O60869 148 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 TBX10O75333 385 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 GGPS1O95749 300 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 KCNA3P22001 575 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 MARK3P27448 753 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 GCAP28676 217 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 NOVP48745 357 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 NEK3P51956 506 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 FAM71AQ8IYT1 594 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 HIPK4Q8NE63 616 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 C7orf43Q8WVR3 580 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 SGK1O00141 431 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 USP1O94782 785 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 PRELPP51888 382 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 MFAP3P55082 362 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 MOGSQ13724 837 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 TFDP1Q14186 410 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 SGSM1Q2NKQ1 1148 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 FBXO27Q8NI29 283 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 CRYGNQ8WXF5 182 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 TRIM4Q9C037 500 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 LARSQ9P2J5 1176 aaKnown RBP10.13□□□□□ -0.79
SMC1B-202ENST00000404354 PRR12Q9ULL5 1215 aa10.13□□□□□ -0.79
SMC1B-202ENST00000404354 PHLPP1O60346 1717 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms