RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 PAN2Q504Q3 1202 aaKnown RBP13.27□□□□□ -0.29
LINC00339-201ENST00000404210 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 LRRC52Q8N7C0 313 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 LMO3Q8TAP4 145 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 TAF4BQ92750 862 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 ERGIC2Q96RQ1 377 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 VRTNQ9H8Y1 702 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
LINC00339-201ENST00000404210 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 TMEM189-UBE2V1I3L0A0 370 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 PODXLO00592 558 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 NRP1O14786 923 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 AP5Z1O43299 807 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 ZC3H11AO75152 810 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00339-201ENST00000404210 PNPLA4P41247 253 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 OR1G1P47890 313 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 ALDH7A1P49419 539 aaKnown RBP13.26□□□□□ -0.29
LINC00339-201ENST00000404210 MYL6P60660 151 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 MYO1EQ12965 1108 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 SEMA4DQ92854 862 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
LINC00339-201ENST00000404210 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
LINC00339-201ENST00000404210 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 B4GALT3O60512 393 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
LINC00339-201ENST00000404210 LAG3P18627 525 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 SLC9A1P19634 815 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 PON1P27169 355 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 SLC11A1P49279 550 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 TAF6P49848 677 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 MRE11P49959 708 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 BCAR1P56945 870 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 LILRA4P59901 499 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
LINC00339-201ENST00000404210 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
LINC00339-201ENST00000404210 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 XYLT2Q9H1B5 865 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
LINC00339-201ENST00000404210 SCN1AP35498 2009 aa13.25□□□□□ -0.29
LINC00339-201ENST00000404210 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 PPEF2O14830 753 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 LRRN2O75325 713 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 B3GAT3O94766 335 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 PBX1P40424 430 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 RABGGTBP53611 331 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 SYCP1Q15431 976 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 SV2CQ496J9 727 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-201ENST00000404210 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 COLGALT1Q8NBJ5 622 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 TATDN2Q93075 761 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
LINC00339-201ENST00000404210 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
LINC00339-201ENST00000404210 A0A1W2PPC1 479 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 TRAPPC3O43617 180 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 TADA2AO75478 443 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 BMPR1AP36894 532 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 AARSP49588 968 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00339-201ENST00000404210 ZNF75DP51815 510 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 RAB30Q15771 203 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
LINC00339-201ENST00000404210 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms