RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ATG2AQ2TAZ0 1938 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 TADA2AO75478 443 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 EFEMP2O95967 443 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 C4BPAP04003 597 aaKnown RBP31.67■■■□□ 2.66
USP42-202ENST00000404008 POLR2BP30876 1174 aaKnown RBP31.67■■■□□ 2.66
USP42-202ENST00000404008 FXR1P51114 621 aaKnown RBP eCLIP31.67■■■□□ 2.66
USP42-202ENST00000404008 KRT17Q04695 432 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 GPM6BQ13491 265 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 NCAPHQ15003 741 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 TCERG1LQ5VWI1 586 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 TDRD10Q5VZ19 366 aaKnown RBP31.67■■■□□ 2.66
USP42-202ENST00000404008 SCARA3Q6AZY7 606 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 FAM114A1Q8IWE2 563 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 AOPEPQ8N6M6 819 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 VN1R3Q9BXE9 311 aa31.67■■■□□ 2.66
USP42-202ENST00000404008 ALG13Q9NP73 1137 aaKnown RBP31.67■■■□□ 2.66
USP42-202ENST00000404008 GTF2H1P32780 548 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 LRSAM1Q6UWE0 723 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 C15orf39Q6ZRI6 1047 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 SPPL3Q8TCT6 385 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 AGAP1Q9UPQ3 857 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 LZTS1Q9Y250 596 aa31.66■■■□□ 2.66
USP42-202ENST00000404008 STX10O60499 249 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 CAVIN2O95810 425 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 GCLMP48507 274 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 RBP5P82980 135 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 ZACNQ401N2 412 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 HSP90AA4PQ58FG1 418 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 CDKAL1Q5VV42 579 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 SV2AQ7L0J3 742 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 DDX53Q86TM3 631 aaKnown RBP31.65■■■□□ 2.66
USP42-202ENST00000404008 DHX40Q8IX18 779 aaKnown RBP31.65■■■□□ 2.66
USP42-202ENST00000404008 GDPD5Q8WTR4 605 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 FANCLQ9NW38 375 aa31.65■■■□□ 2.66
USP42-202ENST00000404008 SF3B1O75533 1304 aaKnown RBP eCLIP31.64■■■□□ 2.662e-7■■■■■ 41.4
USP42-202ENST00000404008 GRM6O15303 877 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 KRT19P08727 400 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 UBE3AQ05086 875 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 BIRC3Q13489 604 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 GRIN2CQ14957 1233 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 FUT10Q6P4F1 479 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 RNF168Q8IYW5 571 aaPredicted RBP31.64■■■□□ 2.66
USP42-202ENST00000404008 LRRC52Q8N7C0 313 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 MMRN2Q9H8L6 949 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 TMEM8AQ9HCN3 771 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 NUB1Q9Y5A7 615 aa31.64■■■□□ 2.66
USP42-202ENST00000404008 VWA8A3KMH1 1905 aa31.64■■■□□ 2.65
USP42-202ENST00000404008 RFXAPO00287 272 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 DNAJB1P25685 340 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 LILRA4P59901 499 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 ZNF445P59923 1031 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 ZNF560Q96MR9 790 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 GPR62Q9BZJ7 368 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 MAGEC2Q9UBF1 373 aaPredicted RBP31.63■■■□□ 2.65
USP42-202ENST00000404008 STK39Q9UEW8 545 aa31.63■■■□□ 2.65
USP42-202ENST00000404008 LPXNO60711 386 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 PHACTR2O75167 634 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 VNN1O95497 513 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 CST3P01034 146 aaPredicted RBP31.62■■■□□ 2.65
USP42-202ENST00000404008 PNPLA4P41247 253 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 BRCC3P46736 316 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 AARSP49588 968 aaKnown RBP eCLIP31.62■■■□□ 2.65
USP42-202ENST00000404008 IQCB1Q15051 598 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 CREBRFQ8IUR6 639 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 POF1BQ8WVV4 589 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 HSD3B7Q9H2F3 369 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 PRDM12Q9H4Q4 367 aa31.62■■■□□ 2.65
USP42-202ENST00000404008 PUF60Q9UHX1 559 aaKnown RBP31.62■■■□□ 2.65
USP42-202ENST00000404008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP31.62■■■□□ 2.65
USP42-202ENST00000404008 SMTNL1A8MU46 457 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 KCNJ18B7U540 433 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 SPTLC1O15269 473 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 TRAPPC3O43617 180 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 PAX3P23760 479 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 EEF1GP26641 437 aaKnown RBP31.61■■■□□ 2.65
USP42-202ENST00000404008 TAF6P49848 677 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 MXI1P50539 228 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 KCNJ12Q14500 433 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 KRT39Q6A163 491 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 FAM161BQ96MY7 647 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 TSPY26PQ9H489 355 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 CBX8Q9HC52 389 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 R3HCC1Q9Y3T6 440 aaKnown RBP31.61■■■□□ 2.65
USP42-202ENST00000404008 TSC2P49815 1807 aa31.61■■■□□ 2.65
USP42-202ENST00000404008 I3L4J1 428 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 SOD2P04179 222 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 MTIF2P46199 727 aaKnown RBP31.6■■■□□ 2.65
USP42-202ENST00000404008 ELAVL2Q12926 359 aaKnown RBP31.6■■■□□ 2.65
USP42-202ENST00000404008 TRPC3Q13507 836 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 SV2CQ496J9 727 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 CBWD6Q4V339 395 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 TIGD5Q53EQ6 642 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 TCP11X2Q5H9J9 407 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 CBWD3Q5JTY5 395 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 CBWD5Q5RIA9 395 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 TAS1R1Q7RTX1 841 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 SUSD3Q96L08 255 aa31.6■■■□□ 2.65
USP42-202ENST00000404008 NCOA4Q13772 614 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 CAMK1Q14012 370 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 Q7L0L9 218 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms