RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KCNK12Q9HB15 430 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 PANK4Q9NVE7 773 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.091e-7■■■■□ 19.9
SDF4-203ENST00000403997 CPSF3Q9UKF6 684 aaKnown RBP14.47□□□□□ -0.09
SDF4-203ENST00000403997 AGO2Q9UKV8 859 aaKnown RBP14.47□□□□□ -0.09
SDF4-203ENST00000403997 EXOC7Q9UPT5 735 aa14.47□□□□□ -0.09
SDF4-203ENST00000403997 TULP1O00294 542 aaPredicted RBP14.46□□□□□ -0.09
SDF4-203ENST00000403997 CUTAO60888 179 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 F13A1P00488 732 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 ADRB2P07550 413 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 CYP3A5P20815 502 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 FSHRP23945 695 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 NTHL1P78549 312 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 ROR1Q01973 937 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 TDGQ13569 410 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 MRPL58Q14197 206 aaKnown RBP14.46□□□□□ -0.09
SDF4-203ENST00000403997 SLC8B1Q6J4K2 584 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 RTL10Q7L3V2 364 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 BEST2Q8NFU1 509 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 ZNF461Q8TAF7 563 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 ACCSQ96QU6 501 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 IKZF4Q9H2S9 585 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 IGSF9Q9P2J2 1179 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 EPS15L1Q9UBC2 864 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 FBXL5Q9UKA1 691 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 STYXL1Q9Y6J8 313 aa14.46□□□□□ -0.09
SDF4-203ENST00000403997 PRRG1O14668 218 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 TBC1D4O60343 1298 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 PPP1R37O75864 691 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 PDGFBP01127 241 aaPredicted RBP14.45□□□□□ -0.1
SDF4-203ENST00000403997 KCNA1Q09470 495 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 TMEM132DQ14C87 1099 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 L1TD1Q5T7N2 865 aaKnown RBP14.45□□□□□ -0.1
SDF4-203ENST00000403997 SPATA1Q5VX52 437 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 DSTYKQ6XUX3 929 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 SYCP3Q8IZU3 236 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 RSAD2Q8WXG1 361 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 DHX58Q96C10 678 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 STRA6Q9BX79 667 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 LRRC27Q9C0I9 530 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
SDF4-203ENST00000403997 DOCK6Q96HP0 2047 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 ZDBF2Q9HCK1 2354 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 M0QZQ0 153 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 ABLIM3O94929 683 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 NFICP08651 508 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 LAMP2P13473 410 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 ADSSP30520 456 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 CASP5P51878 434 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 AMPD3Q01432 767 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 YWHAHQ04917 246 aaPredicted RBP14.44□□□□□ -0.1
SDF4-203ENST00000403997 ALCAMQ13740 583 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 PKP1Q13835 747 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 ZNF280DQ6N043 979 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 SHC4Q6S5L8 630 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 USP37Q86T82 979 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 IQUBQ8NA54 791 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 KCNG4Q8TDN1 519 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 NXPE3Q969Y0 559 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 KCNH6Q9H252 994 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 TNMDQ9H2S6 317 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 ASB7Q9H672 318 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 HCFC1R1Q9NWW0 138 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 DERAQ9Y315 318 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
SDF4-203ENST00000403997 CACNA1AO00555 2505 aa14.44□□□□□ -0.1
SDF4-203ENST00000403997 FRMD3A2A2Y4 597 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 OAZ2O95190 189 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 LRG1P02750 347 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 POU2F2P09086 479 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 ATF2P15336 505 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 AVPR2P30518 371 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 ME1P48163 572 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 LILRA4P59901 499 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 POU5F1Q01860 360 aaKnown RBP14.43□□□□□ -0.1
SDF4-203ENST00000403997 E2F4Q16254 413 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 PABPC1LQ4VXU2 614 aaKnown RBP14.43□□□□□ -0.1
SDF4-203ENST00000403997 IER5LQ5T953 404 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 C9orf57Q5W0N0 161 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 TPGS2Q68CL5 300 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 CRELD2Q6UXH1 353 aaPredicted RBP14.43□□□□□ -0.1
SDF4-203ENST00000403997 SLC44A3Q8N4M1 653 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 ITFG1Q8TB96 612 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 FAM213AQ9BRX8 229 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 FGFBP2Q9BYJ0 223 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 MFSD1Q9H3U5 465 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 CUEDC2Q9H467 287 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 KBTBD4Q9NVX7 518 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
SDF4-203ENST00000403997 FBXL21Q9UKT6 434 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 CDH7Q9ULB5 785 aa14.43□□□□□ -0.1
SDF4-203ENST00000403997 DUSP12Q9UNI6 340 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms