RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KLHL14Q9P2G3 628 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 P4HA2O15460 535 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 MAGEA4P43358 317 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 VSIG1Q86XK7 387 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 ARL2BPQ9Y2Y0 163 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
RBM39-206ENST00000403542 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 TLR3O15455 904 aaKnown RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 ZNF862O60290 1169 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 MTA2O94776 668 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ERFP50548 548 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 GPC3P51654 580 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 MTERF2Q49AM1 385 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ARHGEF16Q5VV41 709 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 TRIM68Q6AZZ1 485 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 TMEM109Q9BVC6 243 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 A0A1W2PPM1 405 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 HLA-DRAP01903 254 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ICAM1P05362 532 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 TAC1P20366 129 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 MSH2P43246 934 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 NRLP54845 237 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 PSMC5P62195 406 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 GPS1Q13098 491 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 PTK6Q13882 451 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 ZBED8Q8IZ13 594 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 C12orf50Q8NA57 414 aaPredicted RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 CCDC134Q9H6E4 229 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
RBM39-206ENST00000403542 GRID1Q9ULK0 1009 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 RIPK3Q9Y572 518 aa12.71□□□□□ -0.37
RBM39-206ENST00000403542 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 CBX6O95503 412 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 RPA3P35244 121 aaPredicted RBP12.71□□□□□ -0.38
RBM39-206ENST00000403542 HSD17B4P51659 736 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 ARSEP51690 589 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 NCKAP1LP55160 1127 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 OVGP1Q12889 678 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 BNIP1Q12981 228 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 MYBPC2Q14324 1141 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.381e-13■■■□□ 18
RBM39-206ENST00000403542 PGM5Q15124 567 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 BRDTQ58F21 947 aaPredicted RBP12.71□□□□□ -0.38
RBM39-206ENST00000403542 TMEM121Q9BTD3 319 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 FEM1BQ9UK73 627 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 EXOC7Q9UPT5 735 aa12.71□□□□□ -0.38
RBM39-206ENST00000403542 F8VP50 259 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 CDH16O75309 829 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 GSTA1P08263 222 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 PECAM1P16284 738 aaPredicted RBP12.7□□□□□ -0.38
RBM39-206ENST00000403542 CA4P22748 312 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 GNA15P30679 374 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 LIG4P49917 911 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
RBM39-206ENST00000403542 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 MAP4K3Q8IVH8 894 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 TMEM130Q8N3G9 435 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 ATRNL1Q5VV63 1379 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 NEBLO76041 1014 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 APBA3O96018 575 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 MYBL1P10243 752 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 TRAF1Q13077 416 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
RBM39-206ENST00000403542 KCNT1Q5JUK3 1230 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 ARHGEF18Q6ZSZ5 1173 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 GPD1LQ8N335 351 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
RBM39-206ENST00000403542 APOBEC3GQ9HC16 384 aaKnown RBP12.7□□□□□ -0.38
RBM39-206ENST00000403542 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms