RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ERP27Q96DN0 273 aa15.01□□□□□ -0.01
ATG3-202ENST00000402314 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
ATG3-202ENST00000402314 KIF13BQ9NQT8 1826 aa15□□□□□ -0.01
ATG3-202ENST00000402314 AGTP01019 485 aa15□□□□□ -0.01
ATG3-202ENST00000402314 CHKAP35790 457 aa15□□□□□ -0.01
ATG3-202ENST00000402314 HMGCS2P54868 508 aa15□□□□□ -0.01
ATG3-202ENST00000402314 NCKAP1LP55160 1127 aa15□□□□□ -0.01
ATG3-202ENST00000402314 FSTL1Q12841 308 aa15□□□□□ -0.01
ATG3-202ENST00000402314 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
ATG3-202ENST00000402314 SEZ6Q53EL9 994 aa15□□□□□ -0.01
ATG3-202ENST00000402314 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
ATG3-202ENST00000402314 SNRNP48Q6IEG0 339 aaKnown RBP15□□□□□ -0.01
ATG3-202ENST00000402314 DLK2Q6UY11 383 aa15□□□□□ -0.01
ATG3-202ENST00000402314 RFX8Q6ZV50 586 aa15□□□□□ -0.01
ATG3-202ENST00000402314 NLRX1Q86UT6 975 aa15□□□□□ -0.01
ATG3-202ENST00000402314 RHOT2Q8IXI1 618 aa15□□□□□ -0.01
ATG3-202ENST00000402314 ZNF564Q8TBZ8 553 aaPredicted RBP15□□□□□ -0.01
ATG3-202ENST00000402314 BICD1Q96G01 975 aa15□□□□□ -0.01
ATG3-202ENST00000402314 SH3GL3Q99963 347 aa15□□□□□ -0.01
ATG3-202ENST00000402314 MTRF1LQ9UGC7 380 aaKnown RBP15□□□□□ -0.01
ATG3-202ENST00000402314 CBX6O95503 412 aa15□□□□□ -0.01
ATG3-202ENST00000402314 NUDT17P0C025 328 aa15□□□□□ -0.01
ATG3-202ENST00000402314 GM2AP17900 193 aa15□□□□□ -0.01
ATG3-202ENST00000402314 PEX5P50542 639 aa15□□□□□ -0.01
ATG3-202ENST00000402314 ADCY2Q08462 1091 aa15□□□□□ -0.01
ATG3-202ENST00000402314 BLMHQ13867 455 aa15□□□□□ -0.01
ATG3-202ENST00000402314 RNF220Q5VTB9 566 aa15□□□□□ -0.01
ATG3-202ENST00000402314 KRT39Q6A163 491 aa15□□□□□ -0.01
ATG3-202ENST00000402314 CCDC60Q8IWA6 550 aaPredicted RBP15□□□□□ -0.01
ATG3-202ENST00000402314 EIF1ADQ8N9N8 165 aaKnown RBP15□□□□□ -0.01
ATG3-202ENST00000402314 ATG4AQ8WYN0 398 aa15□□□□□ -0.01
ATG3-202ENST00000402314 SLCO1B3Q9NPD5 702 aa15□□□□□ -0.01
ATG3-202ENST00000402314 SEPT9Q9UHD8 586 aaPredicted RBP15□□□□□ -0.01
ATG3-202ENST00000402314 PIAS1O75925 651 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 CFHP08603 1231 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 BRD2P25440 801 aaKnown RBP14.99□□□□□ -0.01
ATG3-202ENST00000402314 ACOT2P49753 483 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 POLE2P56282 527 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 ECHDC2Q86YB7 292 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 ANKLE1Q8NAG6 615 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 CCHCR1Q8TD31 782 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 CPA5Q8WXQ8 436 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 SEC14L1Q92503 715 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 SHC3Q92529 594 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 TSC22D3Q99576 134 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 CDC42EP4Q9H3Q1 356 aaKnown RBP14.99□□□□□ -0.01
ATG3-202ENST00000402314 HOMER3Q9NSC5 361 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 O00370 1275 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 CLDN3O15551 220 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 ZBED4O75132 1171 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 PTGIRP43119 386 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 MAP3K10Q02779 954 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 DNAJC3Q13217 504 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 C11orf91Q3C1V1 193 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 MTERF2Q49AM1 385 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 ANO7Q6IWH7 933 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 VSTM1Q6UX27 236 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 TAOK1Q7L7X3 1001 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 RPS6KC1Q96S38 1066 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 SYT15Q9BQS2 421 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 MOV10L1Q9BXT6 1211 aaKnown RBP14.99□□□□□ -0.01
ATG3-202ENST00000402314 XPNPEP1Q9NQW7 623 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 RAB20Q9NX57 234 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 KLHL14Q9P2G3 628 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 RASAL2Q9UJF2 1139 aa14.99□□□□□ -0.01
ATG3-202ENST00000402314 TTC7AQ9ULT0 858 aaPredicted RBP14.99□□□□□ -0.01
ATG3-202ENST00000402314 IRF6O14896 467 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ZBTB7AO95365 584 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 EPHB2P29323 1055 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MYBPC2Q14324 1141 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 CGB2Q6NT52 195 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 TAS1R3Q7RTX0 852 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 PASD1Q8IV76 773 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MAP4K3Q8IVH8 894 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 UCMAQ8WVF2 138 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 LPAR1Q92633 364 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 TMEM143Q96AN5 459 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ZBTB45Q96K62 511 aaPredicted RBP14.98□□□□□ -0.01
ATG3-202ENST00000402314 IFT74Q96LB3 600 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 NUDCD1Q96RS6 583 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 HERPUD2Q9BSE4 406 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MYLK2Q9H1R3 596 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ARHGEF3Q9NR81 526 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 IRAK4Q9NWZ3 460 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ASIC3Q9UHC3 531 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 HACL1Q9UJ83 578 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ARL2BPQ9Y2Y0 163 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 PCDHA10Q9Y5I2 948 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 LYPLA2O95372 231 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 GJB6O95452 261 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 RFC5P40937 340 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MFAP3P55082 362 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 ZBTB41Q5SVQ8 909 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 NIPA1Q7RTP0 329 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 C12orf56Q8IXR9 622 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 UBL4BQ8N7F7 174 aa14.98□□□□□ -0.01
ATG3-202ENST00000402314 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms