RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TCP11Q8WWU5 503 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 KAT2BQ92831 832 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GPRASP2Q96D09 838 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NLRP4Q96MN2 994 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NRBP2Q9NSY0 501 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NFS1Q9Y697 457 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 LY75O60449 1722 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 SGK1O00141 431 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 TRAPPC3O43617 180 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 EXTL3O43909 919 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 WEE2P0C1S8 567 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 BRAFP15056 766 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 NOP14P78316 857 aaKnown RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 LACTBP83111 547 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 NCOA4Q13772 614 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ATP13A4Q4VNC1 1196 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 IZUMO3Q5VZ72 239 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 HIBCHQ6NVY1 386 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 DNAJC24Q6P3W2 148 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 RHOT1Q8IXI2 618 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 LRRC34Q8IZ02 419 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 LRRC71Q8N4P6 559 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ATL2Q8NHH9 583 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 SNF8Q96H20 258 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 OSBPL8Q9BZF1 889 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ZWILCHQ9H900 591 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 A1CFQ9NQ94 594 aaKnown RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ADGRA3Q8IWK6 1321 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 RIPK2O43353 540 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 RARGP13631 454 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 SNRPFP62306 86 aaKnown RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ACTN3Q08043 901 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 UBAP2Q5T6F2 1119 aaKnown RBP8.17□□□□□ -1.1
HDAC9-201ENST00000401921 SLFN12LQ6IEE8 588 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 FAM47EQ6ZV65 393 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 ENOSF1Q7L5Y1 443 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 C12orf56Q8IXR9 622 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 HVCN1Q96D96 273 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 KIAA1586Q9HCI6 787 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 SAYSD1Q9NPB0 183 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 HOXC10Q9NYD6 342 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 CTNNAL1Q9UBT7 734 aa8.17□□□□□ -1.1
HDAC9-201ENST00000401921 TCP11X1B4DZS4 312 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ATP2A1O14983 1001 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 AGTP01019 485 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 GTF2H1P32780 548 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 PEX5P50542 639 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 E2F5Q15329 346 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 B3GNT9Q6UX72 402 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 TBC1D1Q86TI0 1168 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SCYL3Q8IZE3 742 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 CCDC89Q8N998 374 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ITFG2Q969R8 447 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 HAUS2Q9NVX0 235 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 STK38LQ9Y2H1 464 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 TMEM120BA0PK00 339 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 MAFGO15525 162 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 LYPLA2O95372 231 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 LDHAP00338 332 aaKnown RBP8.16□□□□□ -1.1
HDAC9-201ENST00000401921 CYP1A2P05177 515 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ITIH2P19823 946 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 GARTP22102 1010 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 CHKAP35790 457 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 PTGIRP43119 386 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 FNTAP49354 379 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 STAT5BP51692 787 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 CUL2Q13617 745 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 TMEM132BQ14DG7 1078 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 C11orf91Q3C1V1 193 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ZBTB41Q5SVQ8 909 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ZDHHC24Q6UX98 284 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ERICH1Q86X53 443 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ZDHHC14Q8IZN3 488 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 RNF149Q8NC42 400 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 TBC1D31Q96DN5 1066 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 FAXDC2Q96IV6 333 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 MCEEQ96PE7 176 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 STRA6Q9BX79 667 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 C17orf75Q9HAS0 396 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 XPNPEP1Q9NQW7 623 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 ZDHHC18Q9NUE0 388 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SPATS2LQ9NUQ6 558 aaKnown RBP8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC9-201ENST00000401921 GRHL1Q9NZI5 618 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 PCYOX1Q9UHG3 505 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SLC12A6Q9UHW9 1150 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 NENFQ9UMX5 172 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 EXOC1LA0A1B0GW35 172 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 RASA4BC9J798 803 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 O00370 1275 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 RASA4O43374 803 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SPAG7O75391 227 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 CFHP08603 1231 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 SUPT20HL2P0C7V6 817 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 FDX1P10109 184 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 MAN1A1P33908 653 aa8.16□□□□□ -1.1
HDAC9-201ENST00000401921 GCKP35557 465 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms