RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF197O14709 1029 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 PGK2P07205 417 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 PYGBP11216 843 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 BRD2P25440 801 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 FAM20AQ96MK3 541 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 GPR63Q9BZJ6 419 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 FZD1Q9UP38 647 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 HIST1H2AGP0C0S8 130 aaPredicted RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 DDX5P17844 614 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 HIST1H2ADP20671 130 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 NCOA4Q13772 614 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 PRR23CQ6ZRP0 262 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 TRIM48Q8IWZ4 208 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 HIST1H2AHQ96KK5 128 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 HIST1H2AJQ99878 128 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 H2AFJQ9BTM1 129 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 ZBTB39O15060 712 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 HSPA1AP0DMV8 641 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 HSPA1BP0DMV9 641 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 CCDC144BQ3MJ40 725 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 OR2W6PQ8NHA6 318 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 SGF29Q96ES7 293 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 ZNF560Q96MR9 790 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 UNKQ9C0B0 810 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 SLC25A13Q9UJS0 675 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 H0Y626 953 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 ALDH6A1Q02252 535 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 MEI1Q5TIA1 1274 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 SDE2Q6IQ49 451 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 VN1R5Q7Z5H4 357 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 REEP2Q9BRK0 252 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 CHMP2BQ9UQN3 213 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 CHRM3P20309 590 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 ALDH1A3P47895 512 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 DEUP1Q05D60 604 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 TRIM60Q495X7 471 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 C18orf8Q96DM3 657 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 TNIP3Q96KP6 325 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 MYOZ2Q9NPC6 264 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 USE1Q9NZ43 259 aa14.45□□□□□ -0.1
VAPA-202ENST00000400000 LIMA1Q9UHB6 759 aaKnown RBP14.45□□□□□ -0.1
VAPA-202ENST00000400000 SP8Q8IXZ3 490 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 PARK7Q99497 189 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.44□□□□□ -0.12e-9■■■■□ 20.2
VAPA-202ENST00000400000 ORC4O43929 436 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 CSDE1O75534 798 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 LRG1P02750 347 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 DDX39BQ13838 428 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 ARMC6Q6NXE6 501 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 CDC42EP5Q6NZY7 148 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 PPP2R3CQ969Q6 453 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 FOPNLQ96NB1 174 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 EML4Q9HC35 981 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 WBP4O75554 376 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 MAPK9P45984 424 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 DTNAQ9Y4J8 743 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 TTLL13PA6NNM8 815 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 ANGPT2O15123 496 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 AKAP10O43572 662 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 FAM162AQ96A26 154 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 ZFP42Q96MM3 310 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 MYCBPQ99417 103 aaPredicted RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 YY1AP1Q9H869 796 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 DDX56Q9NY93 547 aaKnown RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 ZNF229Q9UJW7 825 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 AIM2O14862 343 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 RAD23BP54727 409 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 ETNK1Q9HBU6 452 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 RAP1GAPP47736 663 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 PPP2R2AP63151 447 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 PRKCEQ02156 737 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 CCDC142Q17RM4 750 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 DEPDC1Q5TB30 811 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 SHC4Q6S5L8 630 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
VAPA-202ENST00000400000 SPASTQ9UBP0 616 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 SLC30A1Q9Y6M5 507 aa14.44□□□□□ -0.1
VAPA-202ENST00000400000 ZC3H11AO75152 810 aaKnown RBP eCLIP14.43□□□□□ -0.11e-12■■■■□ 25.8
VAPA-202ENST00000400000 VTNP04004 478 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 HNRNPH2P55795 449 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 CLEC4FQ8N1N0 589 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 ASAP3Q8TDY4 903 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 CHP1Q99653 195 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 GH1P01241 217 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 SHCBP1Q8NEM2 672 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 SPATS2LQ9NUQ6 558 aaKnown RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 DISP1Q96F81 1524 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 C3orf70A6NLC5 250 aaPredicted RBP14.43□□□□□ -0.1
VAPA-202ENST00000400000 AP2B1P63010 937 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 IER5Q5VY09 327 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 TSC22D3Q99576 134 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 OSBPL1AQ9BXW6 950 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 WNT8AQ9H1J5 351 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 PIF1Q9H611 641 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 DAGLAQ9Y4D2 1042 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 GYS1P13807 737 aa14.43□□□□□ -0.1
VAPA-202ENST00000400000 CDC16Q13042 620 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms