RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 ATP11BQ9Y2G3 1177 aa9.08□□□□□ -0.96
CTNND1-205ENST00000399050 TYW5A2RUC4 315 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 CACNB3P54284 484 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 ITPRIPL1Q6GPH6 555 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 MTHFD1LQ6UB35 978 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 NUP93Q8N1F7 819 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 THAP2Q9H0W7 228 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 ZHX2Q9Y6X8 837 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 E9PCH4 1651 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 C16orf96A6NNT2 1141 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 RSPH10B2B2RC85 870 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PDE5AO76074 875 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SNRPAP09012 282 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 RSPH10BP0C881 870 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 TNFAIP2Q03169 654 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SPDYE1Q8NFV5 336 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 ACTRT1Q8TDG2 376 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 RMDN3Q96TC7 470 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 DCLRE1BQ9H816 532 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 GABBR1Q9UBS5 961 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 DMGDHQ9UI17 866 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 COPAP53621 1224 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 CAAP1Q9H8G2 361 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SRP68Q9UHB9 627 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 HERC5Q9UII4 1024 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 FEM1BQ9UK73 627 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 MYL2P10916 166 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 HSPA13P48723 471 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 FNTAP49354 379 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 CDK17Q00537 523 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 KRT76Q01546 638 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SWSAP1Q6NVH7 229 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SCUBE1Q8IWY4 988 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 CLEC4FQ8N1N0 589 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 RAVER2Q9HCJ3 691 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 EPB41L4AQ9HCS5 686 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 A0A087X0T9 212 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 FAM228BP0C875 321 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 HSPA1AP0DMV8 641 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 HSPA1BP0DMV9 641 aaKnown RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SFNP31947 248 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PPARGP37231 505 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PSMC5P62195 406 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 MTM1Q13496 603 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PIGHQ14442 188 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 PID1Q7Z2X4 250 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 SLC13A5Q86YT5 568 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 BEGAINQ9BUH8 593 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 COA1Q9GZY4 146 aa9.07□□□□□ -0.96
CTNND1-205ENST00000399050 FAM217BQ9NTX9 383 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-205ENST00000399050 LOC100653049A0A140TA62 436 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 KRT34O76011 436 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 CRKP46108 304 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 Q3C1V9 767 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 ZC2HC1CQ53FD0 456 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 MEI1Q5TIA1 1274 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 DSTYKQ6XUX3 929 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 OR9Q1Q8NGQ5 310 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 DDI1Q8WTU0 396 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 NMD3Q96D46 503 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 MAGEB5Q9BZ81 275 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 SARS2Q9NP81 518 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 ZNF335Q9H4Z2 1342 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 RALAP11233 206 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 RPS6P62753 249 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 PDAP1Q13442 181 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 EPHA7Q15375 998 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 C12orf60Q5U649 245 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 ZSWIM1Q9BR11 485 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 LACRTQ9GZZ8 138 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 ZNF302Q9NR11 478 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 CHCHD3Q9NX63 227 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 SLC13A4Q9UKG4 626 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 SLC26A4O43511 780 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 VCAM1P19320 739 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 YWHABP31946 246 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 EFHC2Q5JST6 749 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 PPIL6Q8IXY8 311 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 FAM111AQ96PZ2 611 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 FSBPO95073 299 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 TRADDQ15628 312 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 MTDHQ86UE4 582 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 TASP1Q9H6P5 420 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 WHRNQ9P202 907 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 TSR3Q9UJK0 312 aaKnown RBP9.06□□□□□ -0.96
CTNND1-205ENST00000399050 SPAG6O75602 509 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 HLA-DPA1P20036 260 aa9.06□□□□□ -0.96
CTNND1-205ENST00000399050 XPAP23025 273 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms