RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 LMBRD2Q68DH5 695 aaPredicted RBP27.2■■□□□ 1.94
COL13A1-203ENST00000398969 HIBCHQ6NVY1 386 aaPredicted RBP27.2■■□□□ 1.94
COL13A1-203ENST00000398969 NLRX1Q86UT6 975 aa27.2■■□□□ 1.94
COL13A1-203ENST00000398969 GPRC5DQ9NZD1 345 aa27.2■■□□□ 1.94
COL13A1-203ENST00000398969 BPIFB4P59827 614 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 WLSQ5T9L3 541 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 APOBEC3FQ8IUX4 373 aaKnown RBP27.19■■□□□ 1.94
COL13A1-203ENST00000398969 CCDC63Q8NA47 563 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 KCNK9Q9NPC2 374 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 XPNPEP1Q9NQW7 623 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 PDLIM7Q9NR12 457 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 ARID2Q68CP9 1835 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 CLDN10P78369 228 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 ANKRD42Q8N9B4 389 aa27.19■■□□□ 1.94
COL13A1-203ENST00000398969 PSTPIP1O43586 416 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 MAP2K2P36507 400 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 MTMR2Q13614 643 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 MPP2Q14168 576 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 CCNG2Q16589 344 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 WDR44Q5JSH3 913 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 PRAMEF18Q5VWM3 479 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 CKAP2Q8WWK9 683 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 ATP6V0A1Q93050 837 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 MLXIPLQ9NP71 852 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 ZNF112Q9UJU3 913 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 WDR81Q562E7 1941 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 EXTL3O43909 919 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 RTP1P59025 263 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 TAS2R40P59535 323 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 ZACNQ401N2 412 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 RHOT1Q8IXI2 618 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 GPC2Q8N158 579 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 MCPH1Q8NEM0 835 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 FAM118BQ9BPY3 351 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 ARHGAP28Q9P2N2 729 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 LGALS13Q9UHV8 139 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 AGAP1Q9UPQ3 857 aa27.18■■□□□ 1.94
COL13A1-203ENST00000398969 CTDP1Q9Y5B0 961 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-203ENST00000398969 DGAT1O75907 488 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 HLA-DRAP01903 254 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 BRAFP15056 766 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 NUGGCQ68CJ6 796 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 VSIG10LQ86VR7 867 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 CYP4X1Q8N118 509 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 C11orf70Q9BRQ4 267 aa27.17■■□□□ 1.94
COL13A1-203ENST00000398969 UBOX5O94941 541 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 CFHP08603 1231 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 CETPP11597 493 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 WNT7BP56706 349 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 PSMD6Q15008 389 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 TDRD10Q5VZ19 366 aaKnown RBP27.16■■□□□ 1.94
COL13A1-203ENST00000398969 SPOPLQ6IQ16 392 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 ZNF365Q70YC5 407 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 SCYL3Q8IZE3 742 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 CCDC89Q8N998 374 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 BBOF1Q8ND07 529 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 GPRASP2Q96D09 838 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 ATP6V1G2O95670 118 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 GH1P01241 217 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 FDX1P10109 184 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 ACO1P21399 889 aaKnown RBP27.16■■□□□ 1.94
COL13A1-203ENST00000398969 DSG3P32926 999 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 BAATQ14032 418 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-203ENST00000398969 LIN9Q5TKA1 542 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 XRRA1Q6P2D8 792 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 CEP57Q86XR8 500 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 KATNAL2Q8IYT4 538 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 MYCBPQ99417 103 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-203ENST00000398969 OSBPL8Q9BZF1 889 aa27.16■■□□□ 1.94
COL13A1-203ENST00000398969 GEMIN8Q9NWZ8 242 aaKnown RBP27.16■■□□□ 1.94
COL13A1-203ENST00000398969 CFAP73A6NFT4 308 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 ZBED4O75132 1171 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 SUN1O94901 812 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 C4BPAP04003 597 aaKnown RBP27.15■■□□□ 1.94
COL13A1-203ENST00000398969 TNNI1P19237 187 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 CCND2P30279 289 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 PIK3CAP42336 1068 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 IZUMO3Q5VZ72 239 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 SWSAP1Q6NVH7 229 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-203ENST00000398969 GDAP1Q8TB36 358 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 FNBP1Q96RU3 617 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 KIAA1586Q9HCI6 787 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 TELO2Q9Y4R8 837 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 LIG4P49917 911 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 MAMLD1Q13495 774 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 ANKS1BQ7Z6G8 1248 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 RELL1Q8IUW5 271 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 PASD1Q8IV76 773 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 FAM212AQ96EL1 285 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 IFT74Q96LB3 600 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 WRNIP1Q96S55 665 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 POLR3FQ9H1D9 316 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-203ENST00000398969 ATP6V0A4Q9HBG4 840 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 ADAM22Q9P0K1 906 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 SEPT9Q9UHD8 586 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-203ENST00000398969 GGT7Q9UJ14 662 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 NAALADL1Q9UQQ1 740 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 DOCK1Q14185 1865 aa27.15■■□□□ 1.94
COL13A1-203ENST00000398969 DICER1Q9UPY3 1922 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms