RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RXRBP28702 533 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GBP1P32455 592 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CDO1Q16878 200 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 C1orf228Q6PIY5 440 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SESTD1Q86VW0 696 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 HEXIM2Q96MH2 286 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SMC6Q96SB8 1091 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FIZ1Q96SL8 496 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 INO80BQ9C086 356 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 COX16Q9P0S2 106 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 hCG_2014768A0A024R1R8 64 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 NOP56O00567 594 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TRAPPC3O43617 180 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ZBTB7AO95365 584 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MT-ND3P03897 115 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ARSEP51690 589 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ACTR2P61160 394 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 OVGP1Q12889 678 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 NFIL3Q16649 462 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TRMT10CQ7L0Y3 403 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM35BQ8NCS4 154 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM161BQ8NDZ6 487 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 RSRC1Q96IZ7 334 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 IQCGQ9H095 443 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GOLGA8RI6L899 631 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GHRP10912 638 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MAN1A1P33908 653 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 PSMC4P43686 418 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SCTRP47872 440 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 NLRP11P59045 1033 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 XKR3Q5GH77 459 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 HELQQ8TDG4 1101 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 LRRN4Q8WUT4 740 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ROPN1BQ9BZX4 212 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ACAD9Q9H845 621 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ROPN1Q9HAT0 212 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 COMMD10Q9Y6G5 202 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 AKAP12Q02952 1782 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GTPBP10A4D1E9 387 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 RARGP13631 454 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CREB1P16220 341 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 PSMA2P25787 234 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 NFX1Q12986 1120 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 KCNT1Q5JUK3 1230 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 EXOC3L1Q86VI1 746 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 BORCS6Q96GS4 357 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 APOBEC3GQ9HC16 384 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MYOZ2Q9NPC6 264 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GRHL1Q9NZI5 618 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CNOT7Q9UIV1 285 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TRIM33Q9UPN9 1127 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 H0YGN5 161 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 EXTL3O43909 919 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 OATP04181 439 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SLC1A1P43005 524 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MSH2P43246 934 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CENPCQ03188 943 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ZBTB41Q5SVQ8 909 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 BSPRYQ5W0U4 402 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 C11orf63Q6NUN7 778 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SLC17A8Q8NDX2 589 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 WDR48Q8TAF3 677 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FEZF2Q8TBJ5 459 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 PRPF31Q8WWY3 499 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MCEEQ96PE7 176 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 RBM15Q96T37 977 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TRABDQ9H4I3 376 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM59LQ9UK28 342 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 NFS1Q9Y697 457 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 IGF2BP3O00425 579 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 LDHAP00338 332 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TROVE2P10155 538 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TNFSF9P41273 254 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FKBP1AP62942 108 aaKnown RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ELF3P78545 371 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ATP11AP98196 1134 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 TNFAIP1Q13829 316 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CNGA2Q16280 664 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CCDC89Q8N998 374 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 OR5B17Q8NGF7 314 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 PRCCQ92733 491 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 PGM2Q96G03 612 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CGRRF1Q99675 332 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ZDHHC18Q9NUE0 388 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MAGED2Q9UNF1 606 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 LMO7Q8WWI1 1683 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FNTAP49354 379 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 RGS7P49802 495 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 HSD17B4P51659 736 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 NCKAP1LP55160 1127 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 GPS1Q13098 491 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 FAXCQ5TGI0 409 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 THOC7Q6I9Y2 204 aaKnown RBP5.21□□□□□ -1.57
SMAD4-202ENST00000398417 ARMC9Q7Z3E5 817 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 SULF1Q8IWU6 871 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 MCPH1Q8NEM0 835 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 PPP1R14CQ8TAE6 165 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 P3H4Q92791 437 aa5.21□□□□□ -1.57
SMAD4-202ENST00000398417 CALN1Q9BXU9 219 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms