RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ENOSF1Q7L5Y1 443 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 TMEM39AQ9NV64 488 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 UBQLN1Q9UMX0 589 aaKnown RBP29.56■■■□□ 2.32
CPNE1-203ENST00000397442 GFPT2O94808 682 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 CXCL10P02778 98 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 SERPING1P05155 500 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 MLH1P40692 756 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 ZNF699Q32M78 642 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 SLC24A5Q71RS6 500 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 TAF4BQ92750 862 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 FAM81BQ96LP2 452 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 PPP1R10Q96QC0 940 aaKnown RBP29.56■■■□□ 2.32
CPNE1-203ENST00000397442 GAD1Q99259 594 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 NHEJ1Q9H9Q4 299 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-203ENST00000397442 ESPNB1AK53 854 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 EVI5O60447 810 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 PARNO95453 639 aaKnown RBP29.55■■■□□ 2.32
CPNE1-203ENST00000397442 EN2P19622 333 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-203ENST00000397442 PRKCIP41743 596 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 FAM189BP81408 668 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 SOX4Q06945 474 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-203ENST00000397442 CUL2Q13617 745 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 TOGARAM2Q6ZUX3 1019 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 BEST2Q8NFU1 509 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 VRTNQ9H8Y1 702 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 AGAP1Q9UPQ3 857 aa29.55■■■□□ 2.32
CPNE1-203ENST00000397442 ARL5CA6NH57 179 aa29.54■■■□□ 2.32
CPNE1-203ENST00000397442 FERP16591 822 aa29.54■■■□□ 2.32
CPNE1-203ENST00000397442 RBP5P82980 135 aa29.54■■■□□ 2.32
CPNE1-203ENST00000397442 FAM71AQ8IYT1 594 aa29.54■■■□□ 2.32
CPNE1-203ENST00000397442 C17orf53Q8N3J3 647 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-203ENST00000397442 MIOSQ9NXC5 875 aa29.54■■■□□ 2.32
CPNE1-203ENST00000397442 ATICP31939 592 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 MAPK8IP2Q13387 824 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 RNF169Q8NCN4 708 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 SEPT8Q92599 483 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 PGBD4Q96DM1 585 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 NIF3L1Q9GZT8 377 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 RSAD1Q9HA92 442 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 SCN1AP35498 2009 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 ANO9A1A5B4 782 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 PPEF2O14830 753 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 CYP3A5P20815 502 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 ACO1P21399 889 aaKnown RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 TBXAS1P24557 533 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 EIF4A3P38919 411 aaKnown RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 KLHL30Q0D2K2 578 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 NAB2Q15742 525 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 ASTE1Q2TB18 679 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 FAM43BQ6ZT52 329 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-203ENST00000397442 APBB2Q92870 758 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 JAKMIP2Q96AA8 810 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 VWCEQ96DN2 955 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 HAUS4Q9H6D7 363 aa29.53■■■□□ 2.32
CPNE1-203ENST00000397442 SSU72P8A0A1W2PR75 194 aa29.52■■■□□ 2.32
CPNE1-203ENST00000397442 STAU1O95793 577 aaKnown RBP29.52■■■□□ 2.32
CPNE1-203ENST00000397442 ASPAP45381 313 aa29.52■■■□□ 2.32
CPNE1-203ENST00000397442 CCDC170Q8IYT3 715 aa29.52■■■□□ 2.32
CPNE1-203ENST00000397442 UBR7Q8N806 425 aa29.52■■■□□ 2.32
CPNE1-203ENST00000397442 HPDLQ96IR7 371 aa29.52■■■□□ 2.32
CPNE1-203ENST00000397442 EPN1Q9Y6I3 576 aaPredicted RBP29.52■■■□□ 2.32
CPNE1-203ENST00000397442 ENPP3O14638 875 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 XPOTO43592 962 aaKnown RBP29.51■■■□□ 2.31
CPNE1-203ENST00000397442 NDUFA10O95299 355 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 EOMESO95936 686 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 PTK2Q05397 1052 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 TDRD12Q587J7 1177 aaKnown RBP29.51■■■□□ 2.31
CPNE1-203ENST00000397442 C9orf57Q5W0N0 161 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 FMNL3Q8IVF7 1028 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 DESI2Q9BSY9 194 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 GOLGA2P5Q9HBQ8 144 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 POLIQ9UNA4 740 aa29.51■■■□□ 2.31
CPNE1-203ENST00000397442 BZW2Q9Y6E2 419 aaKnown RBP29.51■■■□□ 2.31
CPNE1-203ENST00000397442 TRIM43BA6NCK2 446 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 IBSPP21815 317 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-203ENST00000397442 ITGB8P26012 769 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 MSNP26038 577 aaKnown RBP29.5■■■□□ 2.31
CPNE1-203ENST00000397442 OLIG1Q8TAK6 271 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 TRIM43Q96BQ3 446 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-203ENST00000397442 RPS6KC1Q96S38 1066 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 UBN1Q9NPG3 1134 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 PIRO00625 290 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 INPPL1O15357 1258 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 CLSTN1O94985 981 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 CLCN1P35523 988 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 SCNN1GP51170 649 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 WDR72Q3MJ13 1102 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 ZNF667Q5HYK9 610 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 ZNF571Q7Z3V5 609 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-203ENST00000397442 FAXDC2Q96IV6 333 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 CCDC42Q96M95 316 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 SYT11Q9BT88 431 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 BCO2Q9BYV7 579 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 KCND1Q9NSA2 647 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 CNTN6Q9UQ52 1028 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 ADGRG1Q9Y653 693 aa29.5■■■□□ 2.31
CPNE1-203ENST00000397442 KIAA0355O15063 1070 aa29.49■■■□□ 2.31
CPNE1-203ENST00000397442 THP07101 528 aa29.49■■■□□ 2.31
CPNE1-203ENST00000397442 LRRC52Q8N7C0 313 aa29.49■■■□□ 2.31
CPNE1-203ENST00000397442 SLC38A7Q9NVC3 462 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms