RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ASB2Q96Q27 587 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 RXFP1Q9HBX9 757 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 BARX2Q9UMQ3 279 aaPredicted RBP27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 TEX28O15482 410 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 TNNC2P02585 160 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 TKTP29401 623 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 LTBRP36941 435 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 RBM10P98175 930 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 DLX2Q07687 328 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 LEXMQ3ZCV2 418 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 APPL2Q8NEU8 664 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 PIK3R5Q8WYR1 880 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 CCDC127Q96BQ5 260 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 FNIP2Q9P278 1114 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 CD207Q9UJ71 328 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 FRMD4BQ9Y2L6 1034 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 HCFC2Q9Y5Z7 792 aa27.43■■□□□ 1.98
TSPAN4-207ENST00000397411 BRWD1Q9NSI6 2320 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 RPL17P18621 184 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 TNNI1P19237 187 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 PAX3P23760 479 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 RPL13P26373 211 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 WNT7BP56706 349 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 STIM1Q13586 685 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 CAMK4Q16566 473 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 CEP135Q66GS9 1140 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 ELMSAN1Q6PJG2 1045 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 ANKS3Q6ZW76 656 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 PALB2Q86YC2 1186 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 CSGALNACT2Q8N6G5 542 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 SPATA20Q8TB22 786 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 LNX1Q8TBB1 728 aaPredicted RBP27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 SUSD3Q96L08 255 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 TRAF3IP3Q9Y228 551 aa27.42■■□□□ 1.98
TSPAN4-207ENST00000397411 SYN3O14994 580 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 TBX10O75333 385 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 GLP2RO95838 553 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 KRT19P08727 400 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 DLATP10515 647 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 CYP24A1Q07973 514 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 MYBPC2Q14324 1141 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 DUOXA2Q1HG44 320 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 PUS10Q3MIT2 529 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 TMEM184AQ6ZMB5 413 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 SLC9A9Q8IVB4 645 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 VN1R2Q8NFZ6 395 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 SLC22A17Q8WUG5 538 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 TSG101Q99816 390 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 MAN1B1Q9UKM7 699 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 PCDHB8Q9UN66 801 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 AGAP1Q9UPQ3 857 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 FAM50BQ9Y247 325 aa27.41■■□□□ 1.98
TSPAN4-207ENST00000397411 H7C4K7 107 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 BIN1O00499 593 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 PIRO00625 290 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 EPCAMP16422 314 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 PRCPP42785 496 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 TAF6P49848 677 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 KCNQ1P51787 676 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 PSMD6Q15008 389 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 LMBRD2Q68DH5 695 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 PTCRAQ6ISU1 281 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 ANKRD54Q6NXT1 300 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 USP37Q86T82 979 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 LMBRD1Q9NUN5 540 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 INTS13Q9NVM9 706 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 DMAC2Q9NW81 257 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 CLEC1BQ9P126 229 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 DPP7Q9UHL4 492 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 COL6A3P12111 3177 aa27.4■■□□□ 1.98
TSPAN4-207ENST00000397411 ANO9A1A5B4 782 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 ARHGEF37A1IGU5 675 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 PPEF2O14830 753 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 GLUD1P00367 558 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 ITGB3P05106 788 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 NR2F2P24468 414 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 CLCN4P51793 760 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 LILRA4P59901 499 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 RBP5P82980 135 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 TJAP1Q5JTD0 557 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 VARS2Q5ST30 1063 aaKnown RBP27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 WDR49Q8IV35 697 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 MFSD14AQ96MC6 490 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 ZNF560Q96MR9 790 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 MTMR12Q9C0I1 747 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 DZANK1Q9NVP4 752 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 ITGA11Q9UKX5 1188 aa27.39■■□□□ 1.98
TSPAN4-207ENST00000397411 VWA8A3KMH1 1905 aa27.39■■□□□ 1.97
TSPAN4-207ENST00000397411 HOXB8P17481 243 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 POLR2BP30876 1174 aaKnown RBP27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 PNPLA4P41247 253 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 ADAM9Q13443 819 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 KCNC3Q14003 757 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 SV2CQ496J9 727 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 CLSTN3Q9BQT9 956 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 APOL5Q9BWW9 433 aa27.38■■□□□ 1.97
TSPAN4-207ENST00000397411 SPATA31D3P0C874 917 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 OR1D2P34982 312 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 PPP1R2P41236 205 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms