RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PLCB2Q00722 1185 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 CETN1Q12798 172 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 UVSSAQ2YD98 709 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 CXorf38Q8TB03 319 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 TAS1R2Q8TE23 839 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 PCDHA11Q9Y5I1 949 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 KIAA1671Q9BY89 1806 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 ALDH2P05091 517 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 SLC11A1P49279 550 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 UBASH3AP57075 661 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 UPP1Q16831 310 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 FKBP15Q5T1M5 1219 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 FBXL13Q8NEE6 735 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 NAP1L5Q96NT1 182 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 IFNKQ9P0W0 207 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 FAN1Q9Y2M0 1017 aa25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 PRG3Q9Y2Y8 225 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-203ENST00000397397 PIRO00625 290 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 NRP1O14786 923 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 GALTP07902 379 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 LAG3P18627 525 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 GBP6Q6ZN66 633 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 RTN4Q9NQC3 1192 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 RAB20Q9NX57 234 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 COQ4Q9Y3A0 265 aa25.42■■□□□ 1.66
TSPAN4-203ENST00000397397 A0A1B0GTH6 734 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 CLSTN1O94985 981 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 PBX3P40426 434 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 ALDH7A1P49419 539 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 MYL6P60660 151 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 UBXN1Q04323 297 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 EPC2Q52LR7 807 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 DCLRE1AQ6PJP8 1040 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 COLGALT1Q8NBJ5 622 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 SEMA4DQ92854 862 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 ZNF560Q96MR9 790 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 ZNF558Q96NG5 402 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 CRACR2AQ9BSW2 395 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 COLEC11Q9BWP8 271 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 AAASQ9NRG9 546 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 MSRAQ9UJ68 235 aa25.41■■□□□ 1.66
TSPAN4-203ENST00000397397 GTPBP10A4D1E9 387 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 NT5C1B-RDH14C9J2C7 533 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 B3GAT3O94766 335 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 SCN1AP35498 2009 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 PBX2P40425 430 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 RAB30Q15771 203 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 KCNT2Q6UVM3 1135 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 LRRC52Q8N7C0 313 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 HPDLQ96IR7 371 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 PBX4Q9BYU1 374 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.4■■□□□ 1.664e-7■■■■■ 121.4
TSPAN4-203ENST00000397397 GCNT4Q9P109 453 aa25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 YBX2Q9Y2T7 364 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-203ENST00000397397 LINC01553A4QN01 128 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 GOLGA6L3A6NEY3 463 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 TEX33O43247 280 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 KIF4AO95239 1232 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 CA3P07451 260 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 IGFBP6P24592 240 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 ATICP31939 592 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 PNPLA4P41247 253 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 TAF6P49848 677 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 MYO1EQ12965 1108 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 EXOC3L4Q17RC7 722 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 SGSM1Q2NKQ1 1148 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 ZNF699Q32M78 642 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 CCDC150Q8NCX0 1101 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 EHBP1Q8NDI1 1231 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 C3orf58Q8NDZ4 430 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 HASPINQ8TF76 798 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 CLP1Q92989 425 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 PI4K2AQ9BTU6 479 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 IMPG2Q9BZV3 1241 aa25.39■■□□□ 1.66
TSPAN4-203ENST00000397397 CARNS1A5YM72 827 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 F8W810 466 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 CBFA2T2O43439 604 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 LRRN2O75325 713 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 NR1I3Q14994 352 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 SV2CQ496J9 727 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 WDR44Q5JSH3 913 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 ELMO3Q96BJ8 720 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 XPO4Q9C0E2 1151 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 INTS2Q9H0H0 1204 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 XYLT2Q9H1B5 865 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 NUB1Q9Y5A7 615 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 PCDHB12Q9Y5F1 795 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 NLRC5Q86WI3 1866 aa25.38■■□□□ 1.65
TSPAN4-203ENST00000397397 TMEM189-UBE2V1I3L0A0 370 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 AP5Z1O43299 807 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 TADA2AO75478 443 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 LINC00271P0C7V0 271 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 LILRA4P59901 499 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SARM1Q6SZW1 724 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 CD300LGQ6UXG3 332 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 TAF4BQ92750 862 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 NKX2-4Q9H2Z4 354 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 MARCH5Q9NX47 278 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SPTLC1O15269 473 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 ARHGEF15O94989 841 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms