RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 SPATA31D4Q6ZUB0 917 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 MYLK4Q86YV6 388 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 FAM71AQ8IYT1 594 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 LRRC8CQ8TDW0 803 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 SLC5A5Q92911 643 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 KREMEN1Q96MU8 473 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 WDR18Q9BV38 432 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 TBC1D10AQ9BXI6 508 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 PREBQ9HCU5 417 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 LRRC42Q9Y546 428 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 ACTL7BQ9Y614 415 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 F5H6K3 240 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 P4HA2O15460 535 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 CFBP00751 764 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 CYP11B1P15538 503 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 RRM1P23921 792 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 RASSF2P50749 326 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 TSNAXIP1Q2TAA8 658 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 CERKLQ49MI3 558 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 GSTA5Q7RTV2 222 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 DTX3LQ8TDB6 740 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 MRRFQ96E11 262 aaKnown RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 HERPUD2Q9BSE4 406 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 NMRK1Q9NWW6 199 aa9.73□□□□□ -0.85
CAPN3-206ENST00000397163 WRAP73Q9P2S5 460 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 R3HDM2Q9Y2K5 976 aaKnown RBP9.73□□□□□ -0.85
CAPN3-206ENST00000397163 IGLV3-22A0A075B6J6 115 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 GOLGA8IPA6NC78 632 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 GOLGA8JA6NMD2 632 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 E7ENQ6 273 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 ASMTLO95671 621 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 POTEJP0CG39 1038 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 MAGEA4P43358 317 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 MFAP3P55082 362 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 TMEM63BQ5T3F8 832 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 C1QTNF12Q5T7M4 302 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 OR52E8Q6IFG1 317 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CDC42EP5Q6NZY7 148 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CAPN12Q6ZSI9 719 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 RFX8Q6ZV50 586 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 ZFPM1Q8IX07 1006 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CCDC89Q8N998 374 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 XXYLT1Q8NBI6 393 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 INPP5DQ92835 1189 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 TMEM117Q9H0C3 514 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 MMADHCQ9H3L0 296 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 ATP9AO75110 1047 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 ATP6V1G1O75348 118 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 PSMD10O75832 226 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 GJC1P36383 396 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CDR2Q01850 454 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 MYBPC2Q14324 1141 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CCDC6Q16204 474 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 APBB1IPQ7Z5R6 666 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 NCAPG2Q86XI2 1143 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 C4orf33Q8N1A6 199 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 ZSWIM2Q8NEG5 633 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 CCDC127Q96BQ5 260 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 RBM15Q96T37 977 aaKnown RBP eCLIP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 SAYSD1Q9NPB0 183 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 HSPBP1Q9NZL4 362 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 NYAP2Q9P242 653 aa9.72□□□□□ -0.85
CAPN3-206ENST00000397163 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.72□□□□□ -0.85
CAPN3-206ENST00000397163 DDX39AO00148 427 aaKnown RBP9.71□□□□□ -0.85
CAPN3-206ENST00000397163 COQ9O75208 318 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 NDUFB10O96000 172 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 CYP3A4P08684 503 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 RALAP11233 206 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 CA4P22748 312 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 GSTT1P30711 240 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 CACNB3P54284 484 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 CACNA2D1P54289 1103 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 TBC1D10BQ4KMP7 808 aaPredicted RBP9.71□□□□□ -0.85
CAPN3-206ENST00000397163 HP1BP3Q5SSJ5 553 aaPredicted RBP9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ACAD10Q6JQN1 1059 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 MAML1Q92585 1016 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 MKL1Q969V6 931 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 CFAP57Q96MR6 1250 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ACCSQ96QU6 501 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 SMC6Q96SB8 1091 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 NDNQ99608 321 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 LXNQ9BS40 222 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 TMEM206Q9H813 350 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 LARSQ9P2J5 1176 aaKnown RBP9.71□□□□□ -0.85
CAPN3-206ENST00000397163 SCOCQ9UIL1 159 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.85
CAPN3-206ENST00000397163 ZSCAN9O15535 394 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 CREB3O43889 395 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms