RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TRIM32Q13049 653 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 C1DQ13901 141 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 TAB1Q15750 504 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF394Q53GI3 561 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 DDI2Q5TDH0 399 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SYDE2Q5VT97 1194 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 TAF8Q7Z7C8 310 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ZBTB38Q8NAP3 1195 aaPredicted RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 OSBPL8Q9BZF1 889 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 LRRC24Q50LG9 513 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 JADE3Q92613 823 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 MAGEA13PA6NCF6 341 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 CENPXA8MT69 81 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 TARSP26639 723 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 TAP1Q03518 808 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ZSWIM7Q19AV6 140 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF618Q5T7W0 954 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 KLHL4Q9C0H6 718 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 STK39Q9UEW8 545 aa10.81□□□□□ -0.68
COL4A4-201ENST00000396625 SRPRBQ9Y5M8 271 aaKnown RBP10.81□□□□□ -0.68
COL4A4-201ENST00000396625 LDHAP00338 332 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 CHI3L1P36222 383 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 CYP51A1Q16850 503 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 SYCP2LQ5T4T6 812 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ATPAF2Q8N5M1 289 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 FAM49AQ9H0Q0 323 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 JAK3P52333 1124 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 RASGRF1Q13972 1273 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 DGKKQ5KSL6 1271 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 BPIFA3Q9BQP9 254 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TCOF1Q13428 1488 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TBKBP1A7MCY6 615 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF23P17027 643 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HOXC9P31274 260 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ARL4DP49703 201 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 EIF3EP60228 445 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TNFAIP2Q03169 654 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TTC39BQ5VTQ0 682 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 KRT74Q7RTS7 529 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 EXD1Q8NHP7 514 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 UBE2OQ9C0C9 1292 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 MFN2O95140 757 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 NUDT2P50583 147 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 GPC3P51654 580 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ARF5P84085 180 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 DCTN2Q13561 401 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 LONRF1Q17RB8 773 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 SETD3Q86TU7 594 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 VPS37AQ8NEZ2 397 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ECSITQ9BQ95 431 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 RAD18Q9NS91 495 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 CLDN3O15551 220 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 PGK2P07205 417 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 LSP1P33241 339 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 PHKA2P46019 1235 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 MTHFD1LQ6UB35 978 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TRIM72Q6ZMU5 477 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 C11orf70Q9BRQ4 267 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ZCCHC17Q9NP64 241 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 E2F8A0AVK6 867 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 DPYSL4O14531 572 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TNPO2O14787 897 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 SERPINH1P50454 418 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 CRYMQ14894 314 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 MAPK11Q15759 364 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 C11orf96Q7Z7L8 435 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TINF2Q9BSI4 451 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 AVENQ9NQS1 362 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TJP2Q9UDY2 1190 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HIST1H2AGP0C0S8 130 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HIST1H2ADP20671 130 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF746Q6NUN9 644 aaPredicted RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 NMD3Q96D46 503 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HIST1H2AHQ96KK5 128 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 HIST1H2AJQ99878 128 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 H2AFJQ9BTM1 129 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 MYLK2Q9H1R3 596 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 XPO7Q9UIA9 1087 aaKnown RBP10.8□□□□□ -0.68
COL4A4-201ENST00000396625 PTK7Q13308 1070 aa10.8□□□□□ -0.68
COL4A4-201ENST00000396625 TPI1P60174 286 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 POLG2Q9UHN1 485 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 SCP2P22307 547 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CDC25AP30304 524 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 SSTR3P32745 418 aaPredicted RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 GUCA1AP43080 201 aaPredicted RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 GCLMP48507 274 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 PIGOQ8TEQ8 1089 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 TSEN34Q9BSV6 310 aaKnown RBP10.79□□□□□ -0.68
COL4A4-201ENST00000396625 CEP44Q9C0F1 390 aa10.79□□□□□ -0.68
COL4A4-201ENST00000396625 E9PBE3 544 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms