RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 NOVA2Q9UNW9 492 aaKnown RBP17.66■□□□□ 0.42
TRIM39-205ENST00000396551 PPARDQ03181 441 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 CCDC125Q86Z20 511 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 GPR20Q99678 358 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
TRIM39-205ENST00000396551 ANKRD65E5RJM6 399 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 TRIM66O15016 1216 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 PROSCO94903 275 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ERLIN2O94905 339 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 NUDT17P0C025 328 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 TBXAS1P24557 533 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-205ENST00000396551 PTGISQ16647 500 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 CDCA2Q69YH5 1023 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-205ENST00000396551 MOB2Q70IA6 237 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 LRRC71Q8N4P6 559 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ANK1P16157 1881 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ABLIM1O14639 778 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 SLC1A1P43005 524 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ZNF132P52740 706 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 TRIM72Q6ZMU5 477 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 HOMEZQ8IX15 550 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ART4Q93070 314 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 RUNDC3BQ96NL0 473 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ACO2Q99798 780 aaKnown RBP17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ADARB2Q9NS39 739 aaKnown RBP17.65■□□□□ 0.42
TRIM39-205ENST00000396551 ADAM22Q9P0K1 906 aa17.65■□□□□ 0.42
TRIM39-205ENST00000396551 THAP12O43422 761 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 GJB6O95452 261 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 LAMTOR4Q0VGL1 99 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 Q3C1V9 767 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 SGO2Q562F6 1265 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 PHF13Q86YI8 300 aaPredicted RBP17.64■□□□□ 0.42
TRIM39-205ENST00000396551 EPN3Q9H201 632 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 SEMA4AQ9H3S1 761 aa17.64■□□□□ 0.42
TRIM39-205ENST00000396551 PASKQ96RG2 1323 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 TP73O15350 636 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 LGR5O75473 907 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 SRGAP2CP0DJJ0 459 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 EIF3BP55884 814 aaKnown RBP17.64■□□□□ 0.41
TRIM39-205ENST00000396551 TAS2R40P59535 323 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 MAMLD1Q13495 774 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 SNX1Q13596 522 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 IER5Q5VY09 327 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 MMS22LQ6ZRQ5 1243 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 ATG4AQ8WYN0 398 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 SLCO2A1Q92959 643 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.41
TRIM39-205ENST00000396551 MRPL4Q9BYD3 311 aaKnown RBP17.64■□□□□ 0.41
TRIM39-205ENST00000396551 AZI2Q9H6S1 392 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 CAND2O75155 1236 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 TOM1L1O75674 476 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 ECEL1O95672 775 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 ASS1P00966 412 aaKnown RBP17.64■□□□□ 0.41
TRIM39-205ENST00000396551 GBP1P32455 592 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 IFFO1Q0D2I5 559 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 TMEM63BQ5T3F8 832 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 WDR49Q8IV35 697 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 ARFGAP2Q8N6H7 521 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 TLCD1Q96CP7 247 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 FAM167AQ96KS9 214 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 MTMR12Q9C0I1 747 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 PARP2Q9UGN5 583 aa17.64■□□□□ 0.41
TRIM39-205ENST00000396551 IGKV6-21A0A0C4DH24 114 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 EFNA5P52803 228 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 SEC24CP53992 1094 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
TRIM39-205ENST00000396551 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
TRIM39-205ENST00000396551 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 RNF149Q8NC42 400 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 PRKCBP05771 671 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 PPP2R2AP63151 447 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 SLC29A2Q14542 456 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF606Q8WXB4 792 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 TCHPQ9BT92 498 aa17.63■□□□□ 0.41
TRIM39-205ENST00000396551 R3HDM2Q9Y2K5 976 aaKnown RBP17.63■□□□□ 0.41
TRIM39-205ENST00000396551 NDUFAB1O14561 156 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 TMOD1P28289 359 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 MYL6P60660 151 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 KRT17Q04695 432 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 PLCB4Q15147 1175 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 VCPIP1Q96JH7 1222 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 MTRF1LQ9UGC7 380 aaKnown RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 IRX5P78411 483 aaPredicted RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 GRM1Q13255 1194 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 MOGSQ13724 837 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 DENND2CQ68D51 928 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 ANKS1BQ7Z6G8 1248 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 COPS5Q92905 334 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 FAM212AQ96EL1 285 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF668Q96K58 619 aaPredicted RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 CPSF3Q9UKF6 684 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms