RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
TRIM39-204ENST00000396548 NAB2Q15742 525 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 PHACTR2O75167 634 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 CCDC172P0C7W6 258 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 GPNMBQ14956 572 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
TRIM39-204ENST00000396548 DEF6Q9H4E7 631 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 ACP6Q9NPH0 428 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 DPP3Q9NY33 737 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
TRIM39-204ENST00000396548 ITGB3P05106 788 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 CYP11B1P15538 503 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 CD52P31358 61 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 ATICP31939 592 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 PALB2Q86YC2 1186 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 SCN1AP35498 2009 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 ANO9A1A5B4 782 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 GUCY2FP51841 1108 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 SPA17Q15506 151 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 WDR24Q96S15 920 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 PCDHB18PQ96TA0 734 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 RNF208Q9H0X6 261 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 FAM105AQ9NUU6 356 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
TRIM39-204ENST00000396548 SMIM28A0A1B0GU29 152 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 FMO1Q01740 532 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 GLYCTKQ8IVS8 523 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 ARMC5Q96C12 935 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 PACSIN1Q9BY11 444 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.23
TRIM39-204ENST00000396548 PTGESO14684 152 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF623O75123 536 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 GHRP10912 638 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 COL6A1P12109 1028 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 MAGEA1P43355 309 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF699Q32M78 642 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 CTU1Q7Z7A3 348 aaKnown RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 SDCBP2Q9H190 292 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 ATF7P17544 494 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 TRPC3Q13507 836 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 FBXO46Q6PJ61 603 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 CAGE1Q8TC20 777 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 PPP1R10Q96QC0 940 aaKnown RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-204ENST00000396548 MYO1AQ9UBC5 1043 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
TRIM39-204ENST00000396548 PIRO00625 290 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 CYP3A5P20815 502 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 CDR2Q01850 454 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 PAK2Q13177 524 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 SYT10Q6XYQ8 523 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 ISCUQ9H1K1 167 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 TAS2R14Q9NYV8 317 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 INTUQ9ULD6 942 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 PPEF2O14830 753 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 CALCAP01258 141 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 RBP5P82980 135 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 ANKRD33Q7Z3H0 272 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 RTN4RL1Q86UN2 441 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 MMEP08473 750 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 CCDC122Q5T0U0 273 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-204ENST00000396548 AGMOQ6ZNB7 445 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 KIAA1328Q86T90 577 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 DNAAF5Q86Y56 855 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 WHAMMQ8TF30 809 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 IMPG2Q9BZV3 1241 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 CISHQ9NSE2 258 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
TRIM39-204ENST00000396548 A0A0U1RQF3 1178 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 INPPL1O15357 1258 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
TRIM39-204ENST00000396548 ARHGAP29Q52LW3 1261 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
TRIM39-204ENST00000396548 ZNF677Q86XU0 584 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms